Evidence map›Paper›PMID 21444690›Full record

ArticleThe Journal of cell biology2011

Replication stress induces 53BP1-containing OPT domains in G1 cells.

Jeanine A Harrigan, Rimma Belotserkovskaya, Julia Coates, Daniela S Dimitrova, Sophie E Polo, Charles R Bradshaw, Peter Fraser, Stephen P Jackson

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 219 papers.

0numbers the graph read from it
0cells of the map it votes in
219citing papers in PubMed
11.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

219 citing papers in PubMed, 329 citations in OpenAlex.

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  11. G-quadruplex stabilization induces DNA breaks in pericentromeric repetitive DNA sequences in B lymphocytes.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  19. Transgenerational Tracking of Chromosomes from Micronuclei.Methods in molecular biology (Clifton, N.J.) · 2025
    Review
  20. Review

159 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Jeanine A HarriganThe Gurdon Institute, University of Cambridge, Cambridge CB2 1QN, England, UK.
Rimma Belotserkovskaya
Julia Coates
Daniela S Dimitrova
Sophie E Polo
Charles R Bradshaw
Peter Fraser
Stephen P Jackson
University of Cambridge · GBBabraham Institute · GBWellcome/Cancer Research UK Gurdon Institute · GB

Funding

Biotechnology and Biological Sciences Research CouncilCancer Research UK 11224Cancer Research UK A11221Cancer Research UK A11224Cancer Research UK C6/A11221Cancer Research UK C6/A11224Wellcome Trust
6 · The paper itself

Abstract

Chromosomal deletions and rearrangements in tumors are often associated with common fragile sites, which are specific genomic loci prone to gaps and breaks in metaphase chromosomes. Common fragile sites appear to arise through incomplete DNA replication because they are induced after partial replication inhibition by agents such as aphidicolin. Here, we show that in G1 cells, large nuclear bodies arise that contain p53 binding protein 1 (53BP1), phosphorylated H2AX (γH2AX), and mediator of DNA damage checkpoint 1 (MDC1), as well as components of previously characterized OPT (Oct-1, PTF, transcription) domains. Notably, we find that incubating cells with low aphidicolin doses increases the incidence and number of 53BP1-OPT domains in G1 cells, and by chromatin immunoprecipitation and massively parallel sequencing analysis of γH2AX, we demonstrate that OPT domains are enriched at common fragile sites. These findings invoke a model wherein incomplete DNA synthesis during S phase leads to a DNA damage response and formation of 53BP1-OPT domains in the subsequent G1.

Indexed as

Cells, CulturedDNA ReplicationG1 PhaseHumansIntracellular Signaling Peptides and ProteinsOctamer Transcription Factor-1Transcription FactorsTranscription, GeneticTumor Suppressor p53-Binding Protein 1Intracellular Signaling Peptides and ProteinsOctamer Transcription Factor-1SNAPC protein complex, humanTP53BP1 protein, humanTranscription FactorsTumor Suppressor p53-Binding Protein 1

Identifiers

PMID21444690
PMCPMC3082192
OpenAlexW2138204634

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.