Evidence map›Paper›PMID 21441914›Full record

ArticleNature structural & molecular biology2011

ABC ATPase signature helices in Rad50 link nucleotide state to Mre11 interface for DNA repair.

Gareth J Williams, R Scott Williams, Jessica S Williams, Gabriel Moncalian, Andrew S Arvai, Oliver Limbo, Grant Guenther, Soumita SilDas, Michal Hammel, Paul Russell and 1 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 115 papers.

0numbers the graph read from it
0cells of the map it votes in
115citing papers in PubMed
8.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

115 citing papers in PubMed, 161 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Dynamic Properties of the DNA Damage Response Mre11/Rad50 Complex.International journal of molecular sciences · 2023
    Review
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. The βScientific reports · 2021
    Article
  18. Review
  19. Review
  20. The dynamic nature of the Mre11-Rad50 DNA break repair complex.Progress in biophysics and molecular biology · 2021
    Review

55 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
  • Erratum issued
5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Gareth J WilliamsLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
R Scott Williams
Jessica S Williams
Gabriel Moncalian
Andrew S Arvai
Oliver Limbo
Grant Guenther
Soumita SilDas
Michal Hammel
Paul Russell
John A Tainer
Scripps Research Institute · USLawrence Berkeley National Laboratory · USNational Institutes of Health · US

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI John A. Tainer · 2001 to 2026
$89.6M
Structural Biology of Genome Maintenance and DNA repairZIAES102765 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WILLIAMS, ROBERT · 2010 to 2025
$35.2M
Studies of the DNA damage checkpointsR01CA077325 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI RUSSELL, PAUL · 1998 to 2017
$7.1M
Mre11/Rad50 Structural Biology for DNA Damage ResponsesR01CA117638 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI RUSSELL, PAUL, TAINER, JOHN A. · 2005 to 2019
$5.6M
Intramural NIH HHS ZIA ES102765NCI NIH HHS CA117638NCI NIH HHS CA77325NCI NIH HHS CA92584NCI NIH HHS P01 CA092584NCI NIH HHS R01 CA077325NCI NIH HHS R01 CA117638
6 · The paper itself

Abstract

The Rad50 ABC-ATPase complex with Mre11 nuclease is essential for dsDNA break repair, telomere maintenance and ataxia telangiectasia-mutated kinase checkpoint signaling. How Rad50 affects Mre11 functions and how ABC-ATPases communicate nucleotide binding and ligand states across long distances and among protein partners are questions that have remained obscure. Here, structures of Mre11-Rad50 complexes define the Mre11 2-helix Rad50 binding domain (RBD) that forms a four-helix interface with Rad50 coiled coils adjoining the ATPase core. Newly identified effector and basic-switch helix motifs extend the ABC-ATPase signature motif to link ATP-driven Rad50 movements to coiled coils binding Mre11, implying an ~30-Å pull on the linker to the nuclease domain. Both RBD and basic-switch mutations cause clastogen sensitivity. Our new results characterize flexible ATP-dependent Mre11 regulation, defects in cancer-linked RBD mutations, conserved superfamily basic switches and motifs effecting ATP-driven conformational change, and they provide a unified comprehension of ABC-ATPase activities.

Indexed as

DNA RepairAdenosine TriphosphatasesAmino Acid SequenceArchaeal ProteinsBinding SitesEndodeoxyribonucleasesExodeoxyribonucleasesModels, MolecularMolecular Sequence DataMutationSchizosaccharomyces pombe ProteinsSequence Homology, Amino AcidAdenosine TriphosphatasesArchaeal ProteinsEndodeoxyribonucleasesExodeoxyribonucleasesMre11 protein, archaealRad50 protein, archaealRad50 protein, S pombeSchizosaccharomyces pombe Proteins

Identifiers

PMID21441914
PMCPMC3118400
OpenAlexW2019016428

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.