Evidence map›Paper›PMID 21437654›Full record

ReviewJournal of applied genetics2011

Chromosome 5 derived small supernumerary marker: towards a genotype/phenotype correlation of proximal chromosome 5 imbalances.

Joana Barbosa Melo, Liesbeth Backx, Joris R Vermeesch, Heloisa G Santos, Ana C Sousa, Nadezda Kosyakova, Anja Weise, Ferdinand von Eggeling, Thomas Liehr, Isabel Marques Carreira

Abstract readCase ReportsReview
PubMed Publisher
In one paragraph

Review in Journal of applied genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
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  7. Review
  8. [Chromosome markers: case report].The Pan African medical journal · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Joana Barbosa MeloLaboratório de Citogenética e Genómica, Centro de Neurociências e Biologia Celular, Faculty of Medicine, University of Coimbra, 3000-354, Coimbra, Portugal. mmelo@fmed.uc.pt
Liesbeth Backx
Joris R Vermeesch
Heloisa G Santos
Ana C Sousa
Nadezda Kosyakova
Anja Weise
Ferdinand von Eggeling
Thomas Liehr
Isabel Marques Carreira
Jena University Hospital · DEHospital de Santa Maria · PTKU Leuven · BEUniversity of Coimbra · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Small supernumerary marker chromosomes (sSMC) are a morphological heterogeneous group of additional abnormal chromosomes that cannot be characterized alone by conventional banding cytogenetics. Molecular cytogenetic techniques are valuable tools for the accurate identification of sSMC and a prerequisite for sound genetic counseling based on refined genotype/phenotype correlation. We describe a new case of a retarded patient with an sSMC derived from chromosome 5. The characterization of the sSMC was done by subcentromere-specific multicolor (subcenM) fluorescence in-situ hybridization (FISH) and by full tilling resolution array analysis, after microdissection and amplification of the marker DNA. Uniparental disomy for normal sister chromosomes of the sSMC(5) was excluded. The karyotype was mos47,XX,+r(5)(::p11.1 → q12.1::)[70%]/46,XX[30%], being the trisomic region between 46.15 ∼ 49.56 Mb and 61.25 ∼ 61.335 Mb, a region known to harbor ∼45 annotated genes. Together with a review of the previously described cases of sSMC(5) and duplications involving the 5q proximal region, we can conclude that trisomy of the 5q11 region is associated with learning difficulties and speech delay.

Indexed as

Chromosome AberrationsChromosome DuplicationTrisomyAbnormalities, MultipleAdultChromosomes, Human, Pair 5Comparative Genomic HybridizationCraniofacial AbnormalitiesFemaleGenetic Association StudiesHumansIn Situ Hybridization, FluorescenceIntellectual DisabilityLanguage Development Disorders

Identifiers

PMID21437654
OpenAlexW2030165060

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.