Evidence map›Paper›PMID 21437283›Full record

ArticlePloS one2011

Tyrosine phosphorylation profiling in FGF-2 stimulated human embryonic stem cells.

Vanessa M Y Ding, Paul J Boersema, Leong Yan Foong, Christian Preisinger, Geoffrey Koh, Subaashini Natarajan, Dong-Yup Lee, Jos Boekhorst, Berend Snel, Simone Lemeer and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. Article
  3. Posttranslational Regulation of Mammalian Sulfur Amino Acid Metabolism.International journal of molecular sciences · 2025
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  6. Regulatory effects of post-translational modifications on zDHHCThe Journal of biological chemistry · 2020
    Review
  7. Article
  8. Article
  9. Fibroblast growth factor receptor influences primary cilium length through an interaction with intestinal cell kinase.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Mechanobiology of human pluripotent stem cells.Tissue engineering. Part B, Reviews · 2013
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Vanessa M Y DingStem Cell Group, Bioprocessing Technology Institute, Agency for Science, Technology and Research, Singapore, Singapore.
Paul J Boersema
Leong Yan Foong
Christian Preisinger
Geoffrey Koh
Subaashini Natarajan
Dong-Yup Lee
Jos Boekhorst
Berend Snel
Simone Lemeer
Albert J R Heck
Andre Choo
Utrecht University · NLAgency for Science, Technology and Research · SGNetherlands Metabolomics Centre · NLSingapore Centre for Environmental Life Sciences Engineering · SGBioprocessing Technology Institute · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The role of fibroblast growth factor-2 (FGF-2) in maintaining undifferentiated human embryonic stem cells (hESC) was investigated using a targeted phosphoproteomics approach to specifically profile tyrosine phosphorylation events following FGF-2 stimulation. A cumulative total number of 735 unique tyrosine phosphorylation sites on 430 proteins were identified, by far the largest inventory to date for hESC. Early signaling events in FGF-2 stimulated hESC were quantitatively monitored using stable isotope dimethyl labeling, resulting in temporal tyrosine phosphorylation profiles of 316 unique phosphotyrosine peptides originating from 188 proteins. Apart from the rapid activation of all four FGF receptors, trans-activation of several other receptor tyrosine kinases (RTKs) was observed as well as induced tyrosine phosphorylation of downstream proteins such as PI3-K, MAPK and several Src family members. Both PI3-K and MAPK have been linked to hESC maintenance through FGF-2 mediated signaling. The observed activation of the Src kinase family members by FGF-2 and loss of pluripotent marker expression post Src kinase inhibition may point to the regulation of cytoskeletal and actin depending processes to maintain undifferentiated hESC.

Indexed as

ProteomicsAmino Acid MotifsAmino Acid SequenceAnimalsCluster AnalysisDatabases, ProteinEmbryonic Stem CellsFibroblast Growth Factor 2HumansMiceModels, BiologicalMolecular Sequence DataPhosphoproteinsPhosphorylationPhosphotyrosineProteomeFibroblast Growth Factor 2PhosphoproteinsPhosphotyrosineProteome

Identifiers

PMID21437283
PMCPMC3060089
OpenAlexW1996856333

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.