Evidence map›Paper›PMID 21436261›Full record

ArticleMolecular endocrinology (Baltimore, Md.)2011

Adipogenic histone mark regulation by matrix metalloproteinase 14 in collagen-rich microenvironments.

Kaori Sato-Kusubata, Yibin Jiang, Yoko Ueno, Tae-Hwa Chun

Open access · bronzeAbstract read
In one paragraph

Article in Molecular endocrinology (Baltimore, Md.), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Fat fibrosis: friend or foe?JCI insight · 2018
    Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Fat depot-specific gene signature and ECM remodeling of Sca1(high) adipose-derived stem cells.Matrix biology : journal of the International Society for Matrix Biology · 2014
    Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Kaori Sato-KusubataDivision of Metabolism, Endocrinology, and Diabetes, Department of Internal Medicine, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
Yibin Jiang
Yoko Ueno
Tae-Hwa Chun
Tokyo University of Science · JPUniversity of Michigan–Ann Arbor · US

Funding

PUBLIC HEALTH DEMONSTRATIONP60DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MYERS, MARTIN G · 1985 to 2012
$26.5M
3-Dimensional Proteolytic Regulation of Adipose Tissue Development and FunctionK08DK078801 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHUN, TAEHWA · 2009 to 2011
$420k
MMP14-Dependent Regulation of Visceral Adiposity and InflammationR03DK091433 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHUN, TAEHWA · 2011 to 2012
$155k
NIDDK NIH HHS K08 DK078801NIDDK NIH HHS K08DK078801NIDDK NIH HHS P60 DK020572NIDDK NIH HHS R03 DK091433
6 · The paper itself

Abstract

Adipogenesis is directed by both transcriptional network and posttranslational modification of chromatin structure. Although adipogenesis in vivo proceeds in collagen-rich extracellular matrix (ECM) environments, the impact of ECM proteins and their modifying enzymes on the epigenetic regulation of adipogenesis has been largely unknown. We aimed to define the role of fibrillar type I collagen and its modifying enzymes in regulating adipogenic chromatin signatures and gene regulation in the in vivo-like settings. Adipogenic cocktail induces a robust increase in the level of protranscriptional acetylated histone H3 at lysine 9 (H3K9ac) within 24 h. When cultured atop fibrillar type I collagen gel, however, H3K9ac levels in differentiating 3T3-L1 cells are substantially reduced. The suppression of adipogenic histone mark in differentiating 3T3-L1 cells is type I collagen density dependent and released by heat denaturing of the subjacent collagen substratum, pointing to the critical role played by the triple-helical structure of type I collagen. By probing adipogenic collagenolysis with a series of proteinase inhibitors, matrix metalloproteinase (MMP) family members are found to be responsible for adipogenic collagenolysis. At the same time, MMP inhibitor specifically blocked the adipogenic induction of H3K9ac. By targeting individual MMP using small interfering RNA oligos, MMP14 was identified as the major adipogenic MMP critical for H3K9 acetylation. Consistently, MMP14-null adipose tissues display diminished protranscriptional histone mark H3K9ac while maintaining repressive histone mark tri-methylated histone H3 at lysine 9 (H3K9me3). Taken together, MMP14-dependent collagenolysis plays the major role in regulating adipogenic histone marks by releasing the epigenetic constraints imposed by fibrillar type I collagen.

Indexed as

AdipogenesisGene Expression Regulation, Developmental3T3-L1 CellsAcetylationAdipose TissueAnimalsCollagen Type IEpigenesis, GeneticFluorescent Antibody Technique, IndirectHistonesMatrix Metalloproteinase 14MethylationMiceMice, KnockoutRatsCollagen Type IHistonesMatrix Metalloproteinase 14Mmp14 protein, mouse

Identifiers

PMID21436261
PMCPMC3082327
OpenAlexW2084789462

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.