Evidence map›Paper›PMID 21430780›Full record

ArticleNature2011

DHODH modulates transcriptional elongation in the neural crest and melanoma.

Richard Mark White, Jennifer Cech, Sutheera Ratanasirintrawoot, Charles Y Lin, Peter B Rahl, Christopher J Burke, Erin Langdon, Matthew L Tomlinson, Jack Mosher, Charles Kaufman and 10 more

Abstract read
In one paragraph

Article in Nature, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 268 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
268citing papers in PubMed, 2 pooled it
15.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

268 citing papers in PubMed, 2 syntheses or guidelines pooled it, 463 citations in OpenAlex.

  1. Pooled it
  2. The Transcriptome of the Zebrafish Embryo After Chemical Exposure: A Meta-Analysis.Toxicological sciences : an official journal of the Society of Toxicology · 2017
    Pooled it
  3. Review
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  8. Review
  9. Synthetic lethality between RB-loss and E2F3 inhibition in small cell cancers targeted by pyrimidine synthesis blockade.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  15. iScience · 2025
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article

208 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 10 institutions in 2 countries.

Richard Mark WhiteStem Cell Program and Hematology/Oncology, Children's Hospital Boston, Howard Hughes Medical Institute, Harvard Medical School, Boston, Massachusetts 02115, USA.
Jennifer Cech
Sutheera Ratanasirintrawoot
Charles Y Lin
Peter B Rahl
Christopher J Burke
Erin Langdon
Matthew L Tomlinson
Jack Mosher
Charles Kaufman
Frank Chen
Hannah K Long
Martin Kramer
Sumon Datta
Donna Neuberg
Scott Granter
Richard A Young
Sean Morrison
Grant N Wheeler
Leonard I Zon
Howard Hughes Medical Institute · USHarvard Stem Cell Institute · USUniversity of East Anglia · GBWhitehead Institute for Biomedical Research · USBrigham and Women's Hospital · USDana-Farber Cancer Institute · USHarvard University Press · USMassachusetts Institute of Technology · USUniversity of Cambridge · GBUniversity of Michigan–Ann Arbor · US

Funding

Transcriptional Regulatory Networks in Living CellsR01HG002668 · NHGRI · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI YOUNG, RICHARD · 2003 to 2016
$17.9M
Physician Scientist Training in Cancer ResearchT32CA009172 · NCI · DANA-FARBER CANCER INSTITUTE · PI Jennifer R Brown, James A. DeCaprio · 1985 to 2026
$17.1M
Cancer Biology in the ZebrafishR01CA103846 · NCI · CHILDREN'S HOSPITAL BOSTON · PI ZON, LEONARD IRA · 2003 to 2022
$7.5M
The role of melanocyte precursors in zebrafish pigmentation disordersK08AR055368 · NIAMS · SLOAN-KETTERING INST CAN RESEARCH · PI WHITE, RICHARD MARK · 2009 to 2013
$635k
Biotechnology and Biological Sciences Research CouncilHoward Hughes Medical InstituteNCI NIH HHS R01 CA103846NCI NIH HHS T32 CA009172NHGRI NIH HHS R01 HG002668NIAMS NIH HHS K08 AR055368
6 · The paper itself

Abstract

Melanoma is a tumour of transformed melanocytes, which are originally derived from the embryonic neural crest. It is unknown to what extent the programs that regulate neural crest development interact with mutations in the BRAF oncogene, which is the most commonly mutated gene in human melanoma. We have used zebrafish embryos to identify the initiating transcriptional events that occur on activation of human BRAF(V600E) (which encodes an amino acid substitution mutant of BRAF) in the neural crest lineage. Zebrafish embryos that are transgenic for mitfa:BRAF(V600E) and lack p53 (also known as tp53) have a gene signature that is enriched for markers of multipotent neural crest cells, and neural crest progenitors from these embryos fail to terminally differentiate. To determine whether these early transcriptional events are important for melanoma pathogenesis, we performed a chemical genetic screen to identify small-molecule suppressors of the neural crest lineage, which were then tested for their effects on melanoma. One class of compound, inhibitors of dihydroorotate dehydrogenase (DHODH), for example leflunomide, led to an almost complete abrogation of neural crest development in zebrafish and to a reduction in the self-renewal of mammalian neural crest stem cells. Leflunomide exerts these effects by inhibiting the transcriptional elongation of genes that are required for neural crest development and melanoma growth. When used alone or in combination with a specific inhibitor of the BRAF(V600E) oncogene, DHODH inhibition led to a marked decrease in melanoma growth both in vitro and in mouse xenograft studies. Taken together, these studies highlight developmental pathways in neural crest cells that have a direct bearing on melanoma formation.

Indexed as

Transcription, GeneticAmino Acid SubstitutionAnimalsAnimals, Genetically ModifiedCell DifferentiationCell LineageCell Line, TumorDihydroorotate DehydrogenaseDisease Models, AnimalGene Expression Regulation, NeoplasticGenes, p53HumansIsoxazolesLeflunomideMelanomaMiceBRAF protein, humanDihydroorotate DehydrogenaseIsoxazolesLeflunomideOxidoreductases Acting on CH-CH Group DonorsProto-Oncogene Proteins B-raf

Identifiers

PMID21430780
PMCPMC3759979
OpenAlexW2166996710

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.