Evidence map›Paper›PMID 21422096›Full record

SynthesisHuman molecular genetics2011

Combined admixture mapping and association analysis identifies a novel blood pressure genetic locus on 5p13: contributions from the CARe consortium.

Xiaofeng Zhu, J H Young, Ervin Fox, Brendan J Keating, Nora Franceschini, Sunjung Kang, Bamidele Tayo, Adebowale Adeyemo, Yun V Sun, Yali Li and 29 more

Open access · bronzeAbstract readMeta-Analysis
In one paragraph

Synthesis in Human molecular genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers, 7 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed, 7 pooled it
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 7 syntheses or guidelines pooled it, 82 citations in OpenAlex.

  1. Pooled it
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  7. Blood pressure loci identified with a gene-centric array.American journal of human genetics · 2011
    Pooled it
  8. Trial
  9. Article
  10. Admixture Mapping of Lipid Traits in Hispanic Americans.Journal of the American Heart Association · 2025
    Article
  11. Admixture Mapping in African Americans Identifies New Risk Loci for HCV-Related Cirrhosis.Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association · 2023
    Article
  12. Association ofJournal of the American Heart Association · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Genetics of Hypertension in African Americans and Others of African Descent.International journal of molecular sciences · 2019
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

39 authors at 20 institutions in 1 country.

Xiaofeng ZhuDepartment of Epidemiology and Biostatistics, School of Medicine, Case Western Reserve University, Cleveland, OH, USA. xiaofeng.zhu@case.edu
J H Young
Ervin Fox
Brendan J Keating
Nora Franceschini
Sunjung Kang
Bamidele Tayo
Adebowale Adeyemo
Yun V Sun
Yali Li
Alanna Morrison
Christopher Newton-Cheh
Kiang Liu
Santhi K Ganesh
Abdullah Kutlar
Ramachandran S Vasan
Albert Dreisbach
Sharon Wyatt
Joseph Polak
Walter Palmas
Solomon Musani
Herman Taylor
Richard Fabsitz
Raymond R Townsend
Daniel Dries
Joseph Glessner
Charleston W K Chiang
Thomas Mosley
Sharon Kardia
David Curb
Joel N Hirschhorn
Charles Rotimi
Alexander Reiner
Charles Eaton
Jerome I Rotter
Richard S Cooper
Susan Redline
Aravinda Chakravarti
Daniel Levy
University of Mississippi · USCase Western Reserve University · USNational Institutes of Health · USHarvard University Press · USLoyola University Chicago · USUniversity of Michigan–Ann Arbor · USUniversity of Pennsylvania · USAugusta University · USBoston Children's Museum · USBoston University · USBroad Institute · USCalifornia University of Pennsylvania · USCedars-Sinai Medical Center · USChildren's Hospital of Philadelphia · USColumbia University · USJohn Brown University · USJohns Hopkins Medicine · USJohns Hopkins University · USMichigan Medicine · USNational Heart Lung and Blood Institute · US

Funding

Framingham Project/LevyZIAHL006001 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI LEVY, DANIEL · 2009 to 2025
$51.1M
Women's Health Initiative Clinical Coordinating CenterN01WH22110 · WH · FRED HUTCHINSON CANCER RESEARCH CENTER · PI PRENTICE, ROSS L · 2007 to 2010
$22.5M
GENETICS OF HYPERTENSION IN BLACKSR01HL053353 · NHLBI · LOYOLA UNIVERSITY CHICAGO · PI COOPER, RICHARD STANLEY · 1995 to 2013
$8.3M
Genomic Predictors of Arteriosclerosis in HypertensivesR01HL087660 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KARDIA, SHARON L · 2007 to 2009
$5.1M
CHS Events Follow-up StudyU01HL080295 · NHLBI · UNIVERSITY OF WASHINGTON · PI PSATY, BRUCE M · 2005 to 2008
$4.6M
JACKSON HEART STUDY--EXAM CENTERN01HC095171 · HC · UNIVERSITY OF MISSISSIPPI MEDICAL CENTER · PI JONES, DANIEL W · 1999 to 2001
$4.6M
DATA COORDINATING CENTER FOR SLEEP HEART STUDYU01HL064360 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI DIENER-WEST, MARIE · 1999 to 2007
$4.4M
Statistical methods for analyzing high-throughput genotype dataR01HG003054 · NHGRI · LOYOLA UNIVERSITY CHICAGO · PI ZHU, XIAOFENG · 2005 to 2017
$3.6M
FAMILIAL AGGREGATION OF OBSTRUCTIVE SLEEP APNEAR01HL046380 · NHLBI · UNIVERSITY HOSPITALS OF CLEVELAND · PI REDLINE, SUSAN S · 1990 to 2005
$3.5M
Fine Mapping of Hypertension Genes Detected by Admixture Mapping in the FBPPR01HL086718 · NHLBI · CASE WESTERN RESERVE UNIVERSITY · PI ZHU, XIAOFENG · 2007 to 2011
$3.3M
Women's Health Initiative Memory Study (WHIMS)N01WH44221 · WH · WAKE FOREST UNIVERSITY HEALTH SCIENCES · 2009 to 2010
$3.1M
Defining an Obesity QTL on Chromosome 3qR01HL074166 · NHLBI · LOYOLA UNIVERSITY CHICAGO · PI ZHU, XIAOFENG · 2004 to 2007
$2.9M
NHGRI NIH HHS HG003054NHLBI NIH HHS HL074166NHLBI NIH HHS HL086718NHLBI NIH HHS HL087660NHLBI NIH HHS HL100245NHLBI NIH HHS HL53353NHLBI NIH HHS N01-HB-72982NHLBI NIH HHS N01-HB-72991NHLBI NIH HHS N01-HB-72992NHLBI NIH HHS N01-HB-72993NHLBI NIH HHS N01-HB-72994NHLBI NIH HHS N01-HB-72997NHLBI NIH HHS N01-HB-72998NHLBI NIH HHS N01-HB-73000NHLBI NIH HHS N01-HB-73001NHLBI NIH HHS N01-HB-73002NHLBI NIH HHS N01-HB-73003NHLBI NIH HHS N01-HB-73-004NHLBI NIH HHS N01-HB-73006NHLBI NIH HHS N01-HB-97051NHLBI NIH HHS N01-HB-97053NHLBI NIH HHS N01-HB-97056NHLBI NIH HHS N01-HB-97058NHLBI NIH HHS N01-HB-97060NHLBI NIH HHS N01-HB-97061NHLBI NIH HHS N01-HB-9-7062NHLBI NIH HHS N01-HB-97064NHLBI NIH HHS N01-HB-97066NHLBI NIH HHS N01-HB-97068NHLBI NIH HHS N01-HB-97069NHLBI NIH HHS N01-HB-97070NHLBI NIH HHS N01-HB-97071NHLBI NIH HHS N01-HB-97072NHLBI NIH HHS N01-HB-97073NHLBI NIH HHS N01-HB-97085NHLBI NIH HHS N01-HC-05187NHLBI NIH HHS N01 HC-15103NHLBI NIH HHS N01-HC-25195NHLBI NIH HHS N01-HC-35129NHLBI NIH HHS N01-HC-45133NHLBI NIH HHS N01-HC-45134NHLBI NIH HHS N01-HC-45204NHLBI NIH HHS N01-HC-45205NHLBI NIH HHS N01-HC-48047NHLBI NIH HHS N01-HC-48048NHLBI NIH HHS N01-HC-48049NHLBI NIH HHS N01-HC-48050NHLBI NIH HHS N01-HC-55015NHLBI NIH HHS N01-HC-55016NHLBI NIH HHS N01-HC-55017NHLBI NIH HHS N01-HC-55018NHLBI NIH HHS N01-HC-55019NHLBI NIH HHS N01-HC-550-20NHLBI NIH HHS N01-HC-55021NHLBI NIH HHS N01 HC-55222,NHLBI NIH HHS N01-HC-65226NHLBI NIH HHS N01-HC-75150NHLBI NIH HHS N01-HC-85079NHLBI NIH HHS N01-HC-85080NHLBI NIH HHS N01-HC-85081NHLBI NIH HHS N01-HC-85082NHLBI NIH HHS N01-HC-85083NHLBI NIH HHS N01-HC-85085NHLBI NIH HHS N01-HC-95095NHLBI NIH HHS N01-HC-95100NHLBI NIH HHS N01-HC-95159NHLBI NIH HHS N01-HC-95160NHLBI NIH HHS N01-HC-95161NHLBI NIH HHS N01-HC-95162NHLBI NIH HHS N01-HC-95163NHLBI NIH HHS N01-HC-95164NHLBI NIH HHS N01-HC-95165NHLBI NIH HHS N01-HC-95166NHLBI NIH HHS N01-HC-95167NHLBI NIH HHS N01-HC-95168NHLBI NIH HHS N01-HC-95169NHLBI NIH HHS N01-HC-95170NHLBI NIH HHS N01-HC-951-71NHLBI NIH HHS N01-HC-95172NHLBI NIH HHS R01 HL46380-01-16NHLBI NIH HHS U01 HL053916NHLBI NIH HHS U01 HL053934NHLBI NIH HHS U01 HL053937NHLBI NIH HHS U01 HL053938NHLBI NIH HHS U01 HL053941NHLBI NIH HHS U01 HL063429NHLBI NIH HHS U01 HL063463NHLBI NIH HHS U01 HL064360NHLBI NIH HHS U01 HL077813NHLBI NIH HHS U01 HL080295PHS HHS N01-H-B-72995PHS HHS N01-H-B-72996PHS HHS N01-H-C-85084WHI NIH HHS N01WH22110WHI NIH HHS N01WH32100WHI NIH HHS N01WH321006WHI NIH HHS N01WH32101WHI NIH HHS N01WH32102WHI NIH HHS N01WH32105WHI NIH HHS N01WH32108WHI NIH HHS N01WH32109WHI NIH HHS N01WH32111WHI NIH HHS N01WH32112WHI NIH HHS N01WH32113WHI NIH HHS N01WH32115WHI NIH HHS N01WH32118WHI NIH HHS N01WH32122WHI NIH HHS N01WH42107WHI NIH HHS N01WH42126WHI NIH HHS N01WH42129WHI NIH HHS N01WH42130WHI NIH HHS N01WH42131WHI NIH HHS N01WH42132WHI NIH HHS N01WH44221WHI NIH HHS N01WH54152
6 · The paper itself

Abstract

Admixture mapping based on recently admixed populations is a powerful method to detect disease variants with substantial allele frequency differences in ancestral populations. We performed admixture mapping analysis for systolic blood pressure (SBP) and diastolic blood pressure (DBP), followed by trait-marker association analysis, in 6303 unrelated African-American participants of the Candidate Gene Association Resource (CARe) consortium. We identified five genomic regions (P< 0.001) harboring genetic variants contributing to inter-individual BP variation. In follow-up association analyses, correcting for all tests performed in this study, three loci were significantly associated with SBP and one significantly associated with DBP (P< 10(-5)). Further analyses suggested that six independent single-nucleotide polymorphisms (SNPs) contributed to the phenotypic variation observed in the admixture mapping analysis. These six SNPs were examined for replication in multiple, large, independent studies of African-Americans [Women's Health Initiative (WHI), Maywood, Genetic Epidemiology Network of Arteriopathy (GENOA) and Howard University Family Study (HUFS)] as well as one native African sample (Nigerian study), with a total replication sample size of 11 882. Meta-analysis of the replication set identified a novel variant (rs7726475) on chromosome 5 between the SUB1 and NPR3 genes, as being associated with SBP and DBP (P< 0.0015 for both); in meta-analyses combining the CARe samples with the replication data, we observed P-values of 4.45 × 10(-7) for SBP and 7.52 × 10(-7) for DBP for rs7726475 that were significant after accounting for all the tests performed. Our study highlights that admixture mapping analysis can help identify genetic variants missed by genome-wide association studies because of drastically reduced number of tests in the whole genome.

Indexed as

Chromosome MappingGenetic LociBlack or African AmericanBlood PressureChromosomes, Human, Pair 5DiastoleDNA-Binding ProteinsFemaleFollow-Up StudiesGene FrequencyGenetic Association StudiesGenetic Predisposition to DiseaseGenome, HumanGenotypeHumansMaleatrial natriuretic factor receptor CDNA-Binding ProteinsReceptors, Atrial Natriuretic FactorSUB1 protein, humanTranscription Factors

Identifiers

PMID21422096
PMCPMC3090198
OpenAlexW2112462823

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.