Evidence map›Paper›PMID 21421783›Full record

ArticleApplied and environmental microbiology2011

In silico evidence for the horizontal transfer of gsiB, a σ(B)-regulated gene in gram-positive bacteria, to lactic acid bacteria.

Ioanna-Areti Asteri, Effrossyni Boutou, Rania Anastasiou, Bruno Pot, Constantinos E Vorgias, Effie Tsakalidou, Konstantinos Papadimitriou

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. FEBS open bio · 2017
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Ioanna-Areti AsteriLaboratory of Dairy Research, Department of Food Science and Technology, Agricultural University of Athens, Iera Odos 75, 11855 Athens, Greece.
Effrossyni Boutou
Rania Anastasiou
Bruno Pot
Constantinos E Vorgias
Effie Tsakalidou
Konstantinos Papadimitriou
National and Kapodistrian University of Athens · GRAgricultural University of Athens · GRApplied Mathematics (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

gsiB, coding for glucose starvation-inducible protein B, is a characteristic member of the σ(Β) stress regulon of Bacillus subtilis and several other Gram-positive bacteria. Here we provide in silico evidence for the horizontal transfer of gsiB in lactic acid bacteria that are devoid of the σ(Β) factor.

Indexed as

Gene Transfer, HorizontalBacterial ProteinsComputational BiologyGene Expression Regulation, BacterialGram-Positive BacteriaSigma FactorBacterial ProteinsSigB protein, BacteriaSigma Factor

Identifiers

PMID21421783
PMCPMC3126443
OpenAlexW2155416580

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.