Evidence map›Paper›PMID 21421757›Full record

ArticleJournal of bacteriology2011

An Agrobacterium VirB10 mutation conferring a type IV secretion system gating defect.

Lois M Banta, Jennifer E Kerr, Eric Cascales, Meghan E Giuliano, Megan E Bailey, Cedar McKay, Vidya Chandran, Gabriel Waksman, Peter J Christie

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Type IV Secretion System Drives Lipid Mixing.bioRxiv : the preprint server for biology · 2026
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  8. Role of the CagY antenna projection inInfection and immunity · 2023
    Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Lois M BantaDepartment of Biology, Williams College, Williamstown, MA 01267, USA. lbanta@williams.edu
Jennifer E Kerr
Eric Cascales
Meghan E Giuliano
Megan E Bailey
Cedar McKay
Vidya Chandran
Gabriel Waksman
Peter J Christie
Haverford College · USWilliams College · USBirkbeck, University of London · GBUniversity College London · GB

Funding

TRANSLOCATION OF DNA ACROSS THE AGROBACTERIUM ENVELOPER01GM048746 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI CHRISTIE, PETER J. · 1998 to 2018
$6.9M
Molecular Basis of Infectious Diseases Training GrantT32AI055449 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI LORENZ, MICHAEL C · 2005 to 2025
$2.6M
TRANSLOCATION OF DNA ACROSS THE AGROBACTERIUM ENVELOPER29GM048746 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI CHRISTIE, PETER J. · 1993 to 1997
–
NIAID NIH HHS 1 T32 AI55449NIAID NIH HHS T32 AI055449NIGMS NIH HHS GM48746NIGMS NIH HHS R01 GM048746
6 · The paper itself

Abstract

Agrobacterium VirB7, VirB9, and VirB10 form a "core complex" during biogenesis of the VirB/VirD4 type IV secretion system (T4SS). VirB10 spans the cell envelope and, in response to sensing of ATP energy consumption by the VirB/D4 ATPases, undergoes a conformational change required for DNA transfer across the outer membrane (OM). Here, we tested a model in which VirB10 regulates substrate passage by screening for mutations that allow for unregulated release of the VirE2 secretion substrate to the cell surface independently of target cell contact. One mutation, G272R, conferred VirE2 release and also rendered VirB10 conformationally insensitive to cellular ATP depletion. Strikingly, G272R did not affect substrate transfer to target cells (Tra(+)) but did block pilus production (Pil(-)). The G272R mutant strain displayed enhanced sensitivity to vancomycin and SDS but did not nonspecifically release periplasmic proteins or VirE2 truncated of its secretion signal. G272 is highly conserved among VirB10 homologs, including pKM101 TraF, and in the TraF X-ray structure the corresponding Gly residue is positioned near an α-helical domain termed the antenna projection (AP), which is implicated in formation of the OM pore. A partial AP deletion mutation (ΔAP) also confers a Tra(+) Pil(-) phenotype; however, this mutation did not allow VirE2 surface exposure but instead allowed the release of pilin monomers or short oligomers to the milieu. We propose that (i) G272R disrupts a gating mechanism in the core chamber that regulates substrate passage across the OM and (ii) the G272R and ΔAP mutations block pilus production at distinct steps of the pilus biogenesis pathway.

Indexed as

Mutation, MissenseAdenosine TriphosphateAgrobacterium tumefaciensBacterial Outer Membrane ProteinsBacterial ProteinsConserved SequenceDNA-Binding ProteinsDNA Mutational AnalysisFimbriae, BacterialIon ChannelsMacromolecular SubstancesMembrane Transport ProteinsProtein ConformationProtein TransportSequence Homology, Amino AcidVirulence FactorsAdenosine TriphosphateBacterial Outer Membrane ProteinsBacterial ProteinsDNA-Binding ProteinsIon ChannelsMacromolecular SubstancesMembrane Transport ProteinsvirE2 protein, AgrobacteriumVirulence Factors

Identifiers

PMID21421757
PMCPMC3133169
OpenAlexW2124094854

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.