Evidence map›Paper›PMID 21420516›Full record

ArticleJournal of proteomics2011

Identification of NaCl stress-responsive apoplastic proteins in rice shoot stems by 2D-DIGE.

Yun Song, Cuijun Zhang, Weina Ge, Yafang Zhang, Alma L Burlingame, Yi Guo

Abstract read
In one paragraph

Article in Journal of proteomics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
8.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 63 citations in OpenAlex.

  1. Streamline Protocol forPlant direct · 2025
    Article
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  6. Review
  7. Article
  8. Advances in understanding salt tolerance in rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Review
  9. Proteomic and physiological responses in mangroveTurkish journal of biology = Turk biyoloji dergisi · 2019
    Article
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  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Yun SongInstitute of Molecular Cell Biology, Hebei Normal University, Shijiazhuang, Hebei Province, 050016, PR China.
Cuijun Zhang
Weina Ge
Yafang Zhang
Alma L Burlingame
Yi Guo
Hebei Normal University · CNUniversity of California, San Francisco · US

Funding

YEAST THREONINE &SERINE KINASESP41RR001614 · NCRR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ORTIZ DE MONTELLANO, PAUL R · 1985 to 2011
$24.1M
PURCHASE OF LTQ FT-ICR HYBRID MASS SPECTROMETER: (HEI) PROTEOMICSS10RR019934 · NCRR · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI BURLINGAME, ALMA L · 2004 to 2004
$1.0M
NCRR NIH HHS P41 RR001614NCRR NIH HHS P41RR001614NCRR NIH HHS RR019934NCRR NIH HHS S10 RR019934
6 · The paper itself

Abstract

Plants have evolved sophisticated systems to cope with adverse environmental conditions such as cold, drought, and salinity. Although a number of stress response networks have been proposed, the role of plant apoplast in plant stress response has been ignored. To investigate the role of apoplastic proteins in the salt stress response, 10-day old rice plants were treated with 200mM NaCl for 1, 6 or 12h, and the soluble apoplast proteins of rice shoot stems were extracted for differential analysis, compared with untreated controls, by 2-D DIGE saturation labeling techniques. One hundred twenty-two significantly changed spots were identified by LC-MS/MS, and 117 spots representing 69 proteins have been identified. Of these proteins, 37 are apoplastic proteins according to the bioinformatic analysis. These proteins are mainly involved in the processes of carbohydrate metabolism, oxido-reduction, and protein processing and degradation. According to their functional categories and cluster analysis, a stress response model of apoplastic proteins has been proposed. These data indicate that the apoplast is important in plant stress signal reception and response.

Indexed as

Stress, PhysiologicalCell WallChromatography, LiquidExtracellular SpaceGene Expression ProfilingGene Expression Regulation, PlantOryzaPlant ProteinsPlant StemsSignal TransductionSodium ChlorideTandem Mass SpectrometryTwo-Dimensional Difference Gel ElectrophoresisPlant ProteinsSodium Chloride

Identifiers

PMID21420516
PMCPMC3107904
OpenAlexW2035211748

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.