Evidence map›Paper›PMID 21419700›Full record

ArticleTrends in parasitology2011

Assembling Fe/S-clusters and modifying tRNAs: ancient co-factors meet ancient adaptors.

Juan D Alfonzo, Julius Lukeš

Abstract read
In one paragraph

Article in Trends in parasitology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Juan D AlfonzoDepartment of Microbiology and OSU Center for RNA Biology, The Ohio State University, Columbus, Ohio 43210, USA. alfonzo.1@osu.edu
Julius Lukeš
Institute of Parasitology · CZThe Ohio State University · US

Funding

tRNA editing by deamination: Balancing affinity and specifictyR01GM084065 · NIGMS · OHIO STATE UNIVERSITY · PI ALFONZO, JUAN D · 2008 to 2021
$4.0M
NIGMS NIH HHS GM084065NIGMS NIH HHS R01 GM084065
6 · The paper itself

Abstract

Trypanosoma brucei undergoes two clearly distinct develomental stages: in the insect vector (procyclic stage) the cells generate the bulk of their energy through respiration, whereas in the bloodstream of the mammalian host (bloodstream stage) they grow mostly glycolytically. Several mitochondrial respiratory proteins require iron-sulfur clusters for activity, and their activation coincides with developmental changes. Likewise some tRNA modification enzymes either require iron-sulfur clusters or use components of the iron-sulfur cluster assembly pathway for activity. These enzymes affect the anticodon loop of various tRNAs and can impact protein synthesis. Herein, the possibility of these pathways being integrated and exploited by T. brucei to carefully coordinate energy demands to translational rates in response to enviromental changes is examined.

Indexed as

AnticodonBiosynthetic PathwaysCarbon-Sulfur LyasesCell NucleusCodonCytoplasmIron-Sulfur ProteinsProtozoan ProteinsRNARNA EditingRNA, MitochondrialRNA, TransferTrypanosoma brucei bruceiAnticodonCarbon-Sulfur LyasesCodoncysteine desulfuraseIron-Sulfur ProteinsProtozoan ProteinsRNARNA, MitochondrialRNA, Transfer

Identifiers

PMID21419700
PMCPMC3104094
OpenAlexW2060728533

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.