Evidence map›Paper›PMID 21419236›Full record

ArticleHeart rhythm2011

Nonsense-mediated mRNA decay caused by a frameshift mutation in a large kindred of type 2 long QT syndrome.

Ignatius Gerardo Zarraga, Li Zhang, Matthew R Stump, Qiuming Gong, G Michael Vincent, Zhengfeng Zhou

Open access · greenAbstract read
In one paragraph

Article in Heart rhythm, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Review
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  4. Posttranscriptional Regulation by Proteins and Noncoding RNAs.Advances in experimental medicine and biology · 2024
    Article
  5. Pairwise biosynthesis of ion channels stabilizes excitability and mitigates arrhythmias.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Non-missense variants of KCNH2 show better outcomes in type 2 long QT syndrome.Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology · 2023
    Article
  7. Four NovelInternational journal of molecular sciences · 2022
    Article
  8. The LratInternational journal of molecular sciences · 2021
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Suppression of premature termination codons as a therapeutic approach.Critical reviews in biochemistry and molecular biology · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Ignatius Gerardo ZarragaDivision of Cardiovascular Medicine, Department of Medicine, Oregon Health & Science University, Portland, Oregon, USA.
Li Zhang
Matthew R Stump
Qiuming Gong
G Michael Vincent
Zhengfeng Zhou
Oregon Health & Science University · USLDS Hospital · USMain Line Health · US

Funding

OREGON CLINICAL AND TRANSLATIONAL SCIENCE INSTITUTEUL1RR024140 · NCRR · OREGON HEALTH & SCIENCE UNIVERSITY · PI ORWOLL, ERIC S. · 2006 to 2011
$61.1M
Pathogenesis of HERG Mutations in Human Long QT SyndromeR01HL068854 · NHLBI · OREGON HEALTH & SCIENCE UNIVERSITY · PI ZHOU, ZHENGFENG · 2002 to 2018
$5.7M
NCRR NIH HHS UL1 RR024140NCRR NIH HHS UL1RR024140 01NHLBI NIH HHS HL68854NHLBI NIH HHS R01 HL068854
6 · The paper itself

Abstract

backgroundNonsense and frameshift mutations are common in congenital long QT syndrome type 2 (LQT2). We previously demonstrated that hERG nonsense mutations cause degradation of mutant mRNA by nonsense-mediated mRNA decay (NMD) and are associated with mild clinical phenotypes. The impact of NMD on the expression of hERG frameshift mutations and their phenotypic severity is not clear.

objectiveThe purpose of this study was to examine the role of NMD in the pathogenesis of a hERG frameshift mutation, P926AfsX14, identified in a large LQT2 kindred and characterize genotype-phenotype correlations.

methodsGenetic screening was performed among family members. Phenotyping was performed by assessment of ECGs and LQTS-related cardiac events. The functional effect of P926AfsX14 was studied using hERG cDNA and minigene constructs expressed in HEK293 cells.

resultsSignificant cardiac events occurred in carriers of the P926AfsX14 mutation. When expressed from cDNA, the P926AfsX14 mutant channel was only mildly defective. However, when expressed from a minigene, the P926AfsX14 mutation caused a significant reduction in mutant mRNA, protein, and hERG current. Inhibition of NMD by RNA interference knockdown of up-frameshift protein 1 partially restored expression of mutant mRNA and protein and led to a significant increase in hERG current in the mutant cells. These results suggest that NMD is involved in the pathogenic mechanism of the P926AfsX14 mutation.

conclusionOur findings suggest that the hERG frameshift mutation P926AfsX14 primarily results in degradation of mutant mRNA by the NMD pathway rather than production of truncated proteins. When combined with environmental triggers and genetic modifiers, LQT2 frameshift mutations associated with NMD can manifest with a severe clinical phenotype.

Indexed as

Frameshift MutationDNA, ComplementaryERG1 Potassium ChannelEther-A-Go-Go Potassium ChannelsFemaleGenetic Association StudiesHEK293 CellsHumansImmunoblottingLong QT SyndromeMaleNonsense Mediated mRNA DecayPatch-Clamp TechniquesPedigreePhosphotransferases (Alcohol Group Acceptor)DNA, ComplementaryERG1 Potassium ChannelEther-A-Go-Go Potassium Channelshygromycin-B kinaseKCNH2 protein, humanPhosphotransferases (Alcohol Group Acceptor)

Identifiers

PMID21419236
PMCPMC3161495
OpenAlexW2085920649

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.