ArticlePlant physiology2011
Comprehensive sequence analysis of 24,783 barley full-length cDNAs derived from 12 clone libraries.
Article in Plant physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 113 papers.
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Who cites it
113 citing papers in PubMed.
- Genetic Architecture of Grain Protein Content in Hulless Barley: Insights from Multi-Environment GWAS.Plants (Basel, Switzerland) · 2026Article
- Genetic resources and pangenome analysis of barley.Breeding science · 2025Article
- Identification of transcriptionally active transposons in Barley.BMC genomic data · 2023Article
- Multilayered regulation of developmentally programmed pre-anthesis tip degeneration of the barley inflorescence.The Plant cell · 2023Article
- Diversity of gene expression responses to light quality in barley.Scientific reports · 2023Article
- Two dominant genes in barley (Breeding science · 2022Article
- Article
- BaRTv2: a highly resolved barley reference transcriptome for accurate transcript-specific RNA-seq quantification.The Plant journal : for cell and molecular biology · 2022Article
- Chromosome-scale assembly of barley cv. 'Haruna Nijo' as a resource for barley genetics.DNA research : an international journal for rapid publication of reports on genes and genomes · 2022Article
- A Novel Mutator-Like Transposable Elements With Unusual Structure and Recent Transpositions in Barley (Frontiers in plant science · 2022Article
- Identification of HvLRX, a new dehydration and light responsive gene in Tibetan hulless barley (Hordeum vulgare var. nudum).Genes & genomics · 2021Article
- Long-read sequence assembly: a technical evaluation in barley.The Plant cell · 2021Article
- Genome-wide analysis of3 Biotech · 2021Article
- Article
- A genetic analysis of the resistance in barley toBreeding science · 2020Article
- History and future perspectives of barley genomics.DNA research : an international journal for rapid publication of reports on genes and genomes · 2020Review
- Genome-wide association mapping of Fusarium langsethiae infection and mycotoxin accumulation in oat (Avena sativa L.).The plant genome · 2020Article
- A Genome Assembly of the Barley 'Transformation Reference' Cultivar Golden Promise.G3 (Bethesda, Md.) · 2020Article
- TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools.Genome biology · 2019Article
- BaRTv1.0: an improved barley reference transcript dataset to determine accurate changes in the barley transcriptome using RNA-seq.BMC genomics · 2019Article
53 more citing papers are in PubMed but not listed here.
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Authors and funding
14 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Full-length cDNA (FLcDNA) libraries consisting of 172,000 clones were constructed from a two-row malting barley cultivar (Hordeum vulgare 'Haruna Nijo') under normal and stressed conditions. After sequencing the clones from both ends and clustering the sequences, a total of 24,783 complete sequences were produced. By removing duplicates between these and publicly available sequences, 22,651 representative sequences were obtained: 17,773 were novel barley FLcDNAs, and 1,699 were barley specific. Highly conserved genes were found in the barley FLcDNA sequences for 721 of 881 rice (Oryza sativa) trait genes with 50% or greater identity. These FLcDNA resources from our Haruna Nijo cDNA libraries and the full-length sequences of representative clones will improve our understanding of the biological functions of genes in barley, which is the cereal crop with the fourth highest production in the world, and will provide a powerful tool for annotating the barley genome sequences that will become available in the near future.
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