Evidence map›Paper›PMID 21414848›Full record

ArticleClinical immunology (Orlando, Fla.)2011

Immune profiling by multiple gene expression analysis in patients at-risk and with type 1 diabetes.

Dongmei Han, Carlos A Leyva, Della Matheson, Davide Mineo, Shari Messinger, Bonnie B Blomberg, Ana Hernandez, Luigi F Meneghini, Gloria Allende, Jay S Skyler and 3 more

Abstract read
In one paragraph

Article in Clinical immunology (Orlando, Fla.), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 31 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. CD4 T cell differentiation in type 1 diabetes.Clinical and experimental immunology · 2016
    Review
  10. Follicular helper T cell signature in type 1 diabetes.The Journal of clinical investigation · 2015
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Dongmei HanDiabetes Research Institute, Leonard Miller School of Medicine, University of Miami, FL 33136, USA. dhan@med.miami.edu
Carlos A Leyva
Della Matheson
Davide Mineo
Shari Messinger
Bonnie B Blomberg
Ana Hernandez
Luigi F Meneghini
Gloria Allende
Jay S Skyler
Rodolfo Alejandro
Alberto Pugliese
Norma S Kenyon
University of Miami · US

Funding

Strategies to Improve Long Term Islet Graft SurvivalU01DK070460 · NIDDK · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI RICORDI, CAMILLO · 2004 to 2012
$11.6M
Type 1 Diabetes TrialNet: Support FacilitiesU01DK061041 · NIDDK · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI SKYLER, JAY S · 2001 to 2007
$6.1M
Type 1 Diabetes TrialNet Clinical Center: Effects of Alefacept in New Onset T1DU01DK085499 · NIDDK · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI BAIDAL, DAVID · 2009 to 2018
$4.9M
REGULATORY T AND B CELL CIRCUITS IN TRANSPLANTATIONR01DK025243 · NIDDK · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI MILLER, JOSHUA · 1986 to 2010
$3.9M
Diabetes TrialNetU01DK061037 · NIDDK · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI MARKS, JENNIFER B · 2001 to 2007
$2.1M
NIDDK NIH HHS R01 DK025243NIDDK NIH HHS U01 DK061037NIDDK NIH HHS U01DK061037NIDDK NIH HHS U01 DK061041NIDDK NIH HHS U01 DK070460NIDDK NIH HHS U01 DK085499NIDDK NIH HHS UO1 DK070460
6 · The paper itself

Abstract

There is a need for biomarkers to monitor the development and progression of type 1 DM. We analyzed mRNA expression levels for granzyme B, perforin, fas ligand, TNF-α, IFN-γ, Foxp3, IL-10, TGF-β, IL-4, IL-6, IL-17, Activation-induced cytidine deaminase (AID) and Immunoglobulin G gamma chain (IgG<gamma>) genes in peripheral blood of at-risk, new-onset and long-term type 1 DM , and healthy controls. The majority of the genes were suppressed in long-term type 1 DM compared to controls and new-onset patients. IFN-γ, IL-4 and IL-10 mRNA levels were significantly higher in new-onset compared to at-risk and long-term groups. There was decreased mRNA expression for AID and IgG<gamma> and up-regulation of IFN-γ with age in controls. Data suggest an overall depressed immunity in long-term type 1 DM. Increased gene expression levels for IFN-γ, IL-4 and IL-10 in new-onset patients from at-risk patients might be used as potential markers for progression of the disease.

Indexed as

AdolescentAdultBiomarkersCytokinesDiabetes Mellitus, Type 1FemaleGene Expression ProfilingHumansLinear ModelsMaleMultivariate AnalysisReverse Transcriptase Polymerase Chain ReactionRNA, MessengerYoung AdultBiomarkersCytokinesRNA, Messenger

Identifiers

PMID21414848
PMCPMC3096683
OpenAlexW1973120803

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.