Evidence map›Paper›PMID 21412220›Full record

SynthesisKidney international2011

An intergenic region on chromosome 13q33.3 is associated with the susceptibility to kidney disease in type 1 and 2 diabetes.

Marcus G Pezzolesi, G David Poznik, Jan Skupien, Adam M Smiles, Josyf C Mychaleckyj, Stephen S Rich, James H Warram, Andrzej S Krolewski

Abstract readMeta-Analysis
In one paragraph

Synthesis in Kidney international, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 3 pooled it
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 3 syntheses or guidelines pooled it, 36 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Article
  6. Review
  7. Review
  8. Review
  9. Genetics and Epigenetics of Diabetic Nephropathy.Kidney diseases (Basel, Switzerland) · 2015
    Review
  10. Article
  11. Review
  12. Role of podocyte B7-1 in diabetic nephropathy.Journal of the American Society of Nephrology : JASN · 2014
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Perspectives on systems biology applications in diabetic kidney disease.Journal of cardiovascular translational research · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Marcus G PezzolesiSection on Genetics and Epidemiology, Research Division, Joslin Diabetes Center, Boston, Massachusetts, USA.
G David Poznik
Jan Skupien
Adam M Smiles
Josyf C Mychaleckyj
Stephen S Rich
James H Warram
Andrzej S Krolewski
Joslin Diabetes Center · USUniversity of Virginia · US

Funding

SPECIAL ASSAY COREP30DK036836 · NIDDK · JOSLIN DIABETES CENTER · PI JEAN E. SCHAFFER · 1986 to 2026
$50.5M
TRAINING IN DIABETES AND METABOLISMT32DK007260 · NIDDK · JOSLIN DIABETES CENTER · PI LAURIE J GOODYEAR · 1986 to 2026
$13.6M
Mapping genes for proteinuria in type II diabetesR01DK058549 · NIDDK · JOSLIN DIABETES CENTER · PI KROLEWSKI, ANDRZEJ S · 2001 to 2010
$4.4M
Mapping Genes for End-Stage Renal Disease in Type 1 DiabetesR01DK077532 · NIDDK · JOSLIN DIABETES CENTER · PI KROLEWSKI, ANDRZEJ S · 2006 to 2008
$1.7M
NIDDK NIH HHS DK007260-31NIDDK NIH HHS DK36836NIDDK NIH HHS DK58549NIDDK NIH HHS DK77532NIDDK NIH HHS P30 DK036836NIDDK NIH HHS R01 DK058549NIDDK NIH HHS R01 DK077532NIDDK NIH HHS T32 DK007260
6 · The paper itself

Abstract

A genome-wide association scan of the Genetics of Kidneys in Diabetes (GoKinD) collections identified four novel susceptibility loci, located on chromosomes 7p14.3, 9q21.32, 11p15.4, and 13q33.3 associated with type 1 diabetic nephropathy. A recent evaluation of these loci in Japanese patients with type 2 diabetes supported an association at the 13q33.3 locus. To follow up these findings, we determined whether single-nucleotide polymorphisms (SNPs) at these same four loci were associated with diabetic nephropathy in the Joslin Study of Genetics of Nephropathy in Type 2 Diabetes collection. A total of 6 SNPs across these loci were genotyped in 646 normoalbuminuric controls and in 743 nephropathy patients of European ancestry. A significant association was identified at the 13q33.3 locus (rs9521445: P = 4.4 × 10(-3)). At this same locus, rs1411766 was also significantly associated with type 2 diabetic nephropathy (P = 0.03). Meta-analysis of these data with those of the Japanese and GoKinD collections significantly improved the strength of the association (P = 9.7 × 10(-9)). In addition, there was a significant association at the 11p15.4 locus (rs451041: P = 0.02). Thus, associations identified in the GoKinD collections on chromosomes 11p15.4 (near the CARS gene) and 13q33.3 (within an intergenic region between MYO16 and IRS2) are susceptibility loci of kidney disease common to both type 1 and 2 diabetes.

Indexed as

AdultAsian PeopleCase-Control StudiesChromosomes, Human, Pair 11Chromosomes, Human, Pair 13Diabetes Mellitus, Type 1Diabetes Mellitus, Type 2Diabetic NephropathiesDNA, IntergenicFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansMaleMiddle AgedPolymorphism, Single NucleotideDNA, Intergenic

Identifiers

PMID21412220
PMCPMC3774030
OpenAlexW2085219683

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.