Evidence map›Paper›PMID 21408104›Full record

ArticlePLoS neglected tropical diseases2011

A portrait of the transcriptome of the neglected trematode, Fasciola gigantica--biological and biotechnological implications.

Neil D Young, Aaron R Jex, Cinzia Cantacessi, Ross S Hall, Bronwyn E Campbell, Terence W Spithill, Sirikachorn Tangkawattana, Prasarn Tangkawattana, Thewarach Laha, Robin B Gasser

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
14.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 94 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Trematode Genomics and Proteomics.Advances in experimental medicine and biology · 2024
    Article
  5. Molecular Cloning and Characterization of aPathogens (Basel, Switzerland) · 2022
    Article
  6. Article
  7. Molecular omics · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Neil D YoungDepartment of Veterinary Science, The University of Melbourne, Werribee, Australia. nyoung@unimelb.edu.au
Aaron R Jex
Cinzia Cantacessi
Ross S Hall
Bronwyn E Campbell
Terence W Spithill
Sirikachorn Tangkawattana
Prasarn Tangkawattana
Thewarach Laha
Robin B Gasser
University of Melbourne · AUKhon Kaen University · THCharles Sturt University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fasciola gigantica (Digenea) is an important foodborne trematode that causes liver fluke disease (fascioliasis) in mammals, including ungulates and humans, mainly in tropical climatic zones of the world. Despite its socioeconomic impact, almost nothing is known about the molecular biology of this parasite, its interplay with its hosts, and the pathogenesis of fascioliasis. Modern genomic technologies now provide unique opportunities to rapidly tackle these exciting areas. The present study reports the first transcriptome representing the adult stage of F. gigantica (of bovid origin), defined using a massively parallel sequencing-coupled bioinformatic approach. From >20 million raw sequence reads, >30,000 contiguous sequences were assembled, of which most were novel. Relative levels of transcription were determined for individual molecules, which were also characterized (at the inferred amino acid level) based on homology, gene ontology, and/or pathway mapping. Comparisons of the transcriptome of F. gigantica with those of other trematodes, including F. hepatica, revealed similarities in transcription for molecules inferred to have key roles in parasite-host interactions. Overall, the present dataset should provide a solid foundation for future fundamental genomic, proteomic, and metabolomic explorations of F. gigantica, as well as a basis for applied outcomes such as the development of novel methods of intervention against this neglected parasite.

Indexed as

Gene Expression ProfilingAnimalsComputational BiologyFasciolaHigh-Throughput Nucleotide Sequencing

Identifiers

PMID21408104
PMCPMC3051338
OpenAlexW2057891777

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.