Evidence map›Paper›PMID 21408005›Full record

ArticlePloS one2011

Comprehensive identification of protein substrates of the Dot/Icm type IV transporter of Legionella pneumophila.

Wenhan Zhu, Simran Banga, Yunhao Tan, Cheng Zheng, Robert Stephenson, Jonathan Gately, Zhao-Qing Luo

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 203 papers.

0numbers the graph read from it
0cells of the map it votes in
203citing papers in PubMed
23.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

203 citing papers in PubMed, 307 citations in OpenAlex.

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  7. Molecular evolution and adaptations ofFrontiers in cellular and infection microbiology · 2026
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  8. Review
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  10. Systematic Discovery of Novel Phosphoinositide-Binding Effectors inbioRxiv : the preprint server for biology · 2025
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  12. Cryo-EM structure revealed a novel F-actin binding motif in abioRxiv : the preprint server for biology · 2025
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  18. mLife · 2025
    Article
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  20. Article

143 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Wenhan ZhuDepartment of Biological Sciences, Purdue University, West Lafayette, Indiana, United States of America.
Simran Banga
Yunhao Tan
Cheng Zheng
Robert Stephenson
Jonathan Gately
Zhao-Qing Luo
Purdue University West Lafayette · US

Funding

Modulation of host Apoptotic pathways by Legionella pneumophilaR01AI069344 · NIAID · PURDUE UNIVERSITY · PI LUO, ZHAO-QING · 2007 to 2011
$1.5M
Modulation of Host Vesicle Trafficking by Legionella pneumophilaK02AI085403 · NIAID · PURDUE UNIVERSITY · PI LUO, ZHAO-QING · 2010 to 2014
$556k
The Roles of Host Factors in the AMPylation Activity of a Bacterial EffectorR21AI092043 · NIAID · PURDUE UNIVERSITY · PI LUO, ZHAO-QING · 2011 to 2012
$413k
NIAID NIH HHS K02 AI085403NIAID NIH HHS K02AI085403NIAID NIH HHS R01 AI069344NIAID NIH HHS R01AI069344NIAID NIH HHS R21 AI092043NIAID NIH HHS R21AI092043
6 · The paper itself

Abstract

A large number of proteins transferred by the Legionella pneumophila Dot/Icm system have been identified by various strategies. With no exceptions, these strategies are based on one or more characteristics associated with the tested proteins. Given the high level of diversity exhibited by the identified proteins, it is possible that some substrates have been missed in these screenings. In this study, we took a systematic method to survey the L. pneumophila genome by testing hypothetical orfs larger than 300 base pairs for Dot/Icm-dependent translocation. 798 of the 832 analyzed orfs were successfully fused to the carboxyl end of β-lactamase. The transfer of the fusions into mammalian cells was determined using the β-lactamase reporter substrate CCF4-AM. These efforts led to the identification of 164 proteins positive in translocation. Among these, 70 proteins are novel substrates of the Dot/Icm system. These results brought the total number of experimentally confirmed Dot/Icm substrates to 275. Sequence analysis of the C-termini of these identified proteins revealed that Lpg2844, which contains few features known to be important for Dot/Icm-dependent protein transfer can be translocated at a high efficiency. Thus, our efforts have identified a large number of novel substrates of the Dot/Icm system and have revealed the diverse features recognizable by this protein transporter.

Indexed as

Amino Acid SequenceBacterial Proteinsbeta-LactamasesLegionella pneumophilaMembrane Transport ProteinsMolecular Sequence DataPeptide LibraryProtein Sorting SignalsProtein TransportRecombinant Fusion ProteinsSubstrate SpecificityBacterial Proteinsbeta-LactamasesMembrane Transport ProteinsPeptide LibraryProtein Sorting SignalsRecombinant Fusion Proteins

Identifiers

PMID21408005
PMCPMC3052360
OpenAlexW2125676148

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.