Evidence map›Paper›PMID 21399640›Full record

ArticleNature structural & molecular biology2011

Rudimentary G-quadruplex-based telomere capping in Saccharomyces cerevisiae.

Jasmine S Smith, Qijun Chen, Liliya A Yatsunyk, John M Nicoludis, Mark S Garcia, Ramon Kranaster, Shankar Balasubramanian, David Monchaud, Marie-Paule Teulade-Fichou, Lara Abramowitz and 2 more

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 131 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. TRF1 and TRF2: pioneering targets in telomere-based cancer therapy.Journal of cancer research and clinical oncology · 2024
    Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Investigating the role of G-quadruplexes atMicrobial cell (Graz, Austria) · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 3 countries.

Jasmine S SmithDepartment of Pathology and Laboratory Medicine, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania, USA.
Qijun Chen
Liliya A Yatsunyk
John M Nicoludis
Mark S Garcia
Ramon Kranaster
Shankar Balasubramanian
David Monchaud
Marie-Paule Teulade-Fichou
Lara Abramowitz
David C Schultz
F Brad Johnson
University of Pennsylvania · USSwarthmore College · USUniversity of Cambridge · GBCentre National de la Recherche Scientifique · FRThe Wistar Institute · USUniversité Paris-Saclay · FR

Funding

STRUCTURAL BASIS FOR EPIGENETICS IN AGING AND LONGEVITYP01AG031862 · NIA · WISTAR INSTITUTE · PI GARCIA, BENJAMIN A · 2008 to 2022
$28.3M
TRAINING PROGRAM IN CELL AND MOLECULAR BIOLOGYT32GM007229 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI BARTOLOMEI, MARISA S. · 1985 to 2023
$14.0M
PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM008216 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI EPSTEIN, DOUGLAS J · 1987 to 2023
$8.3M
Telomere maintenance by Werner syndrome family proteins.R01AG021521 · NIA · UNIVERSITY OF PENNSYLVANIA · PI JOHNSON, F. BRAD · 2004 to 2013
$2.8M
Cancer Research UK A5709NIA NIH HHS P01 AG031862NIA NIH HHS R01 AG021521NIGMS NIH HHS T32 GM007229NIGMS NIH HHS T32 GM008216NIGMS NIH HHS T32 GM008216-22NIGMS NIH HHS T32 GM07229
6 · The paper itself

Abstract

Telomere capping conceals chromosome ends from exonucleases and checkpoints, but the full range of capping mechanisms is not well defined. Telomeres have the potential to form G-quadruplex (G4) DNA, although evidence for telomere G4 DNA function in vivo is limited. In budding yeast, capping requires the Cdc13 protein and is lost at nonpermissive temperatures in cdc13-1 mutants. Here, we use several independent G4 DNA-stabilizing treatments to suppress cdc13-1 capping defects. These include overexpression of three different G4 DNA binding proteins, loss of the G4 DNA unwinding helicase Sgs1, or treatment with small molecule G4 DNA ligands. In vitro, we show that protein-bound G4 DNA at a 3' overhang inhibits 5'→3' resection of a paired strand by exonuclease I. These findings demonstrate that, at least in the absence of full natural capping, G4 DNA can play a positive role at telomeres in vivo.

Indexed as

G-QuadruplexesTelomereBase SequenceDNA PrimersSaccharomyces cerevisiaeDNA Primers

Identifiers

PMID21399640
PMCPMC3119813
OpenAlexW2066153283

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.