Evidence map›Paper›PMID 21398589›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Academic cross-fertilization by public screening yields a remarkable class of protein phosphatase methylesterase-1 inhibitors.

Daniel A Bachovchin, Justin T Mohr, Anna E Speers, Chu Wang, Jacob M Berlin, Timothy P Spicer, Virneliz Fernandez-Vega, Peter Chase, Peter S Hodder, Stephan C Schürer and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 106 citations in OpenAlex.

  1. Article
  2. Article
  3. Catalytic Serine Labeling in Nonaqueous, Acidic Media.Chemistry (Weinheim an der Bergstrasse, Germany) · 2025
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  6. Inhibitors of the Thioesterase Activity ofACS infectious diseases · 2024
    Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. Review
  18. Therapeutic targeting of PP2A.The international journal of biochemistry & cell biology · 2018
    Review
  19. Review
  20. Review

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Daniel A BachovchinThe Skaggs Institute for Chemical Biology and Department of Chemical Physiology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.
Justin T Mohr
Anna E Speers
Chu Wang
Jacob M Berlin
Timothy P Spicer
Virneliz Fernandez-Vega
Peter Chase
Peter S Hodder
Stephan C Schürer
Daniel K Nomura
Hugh Rosen
Gregory C Fu
Benjamin F Cravatt
Scripps Research Institute · USMassachusetts Institute of Technology · US

Funding

UHTS Implementation(Florida)U54MH084512 · NIMH · SCRIPPS RESEARCH INSTITUTE, THE · PI ROSEN, HUGH · 2008 to 2013
$89.2M
DEVELOPMENT OF ENANTIOSELECTIVE NUCLEOPHILIC CATALYSTSR01GM057034 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI FU, GREGORY C · 1998 to 2013
$5.6M
Chemical Probes for Metabolic Pathway Discovery in Human DiseaseR01CA132630 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI CRAVATT, BENJAMIN F · 2007 to 2018
$5.1M
Nucleophilic Planar-Chiral Heterocycles for Activation of Electrophilic HalogensF32GM086040 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI MOHR, JUSTIN T. · 2009 to 2011
$118k
NCI NIH HHS CA132630NCI NIH HHS R01 CA132630NIGMS NIH HHS F32 GM086040NIGMS NIH HHS GM086040NIGMS NIH HHS GM57034NIGMS NIH HHS R01 GM057034NIMH NIH HHS MH084512NIMH NIH HHS U54 MH084512
6 · The paper itself

Abstract

National Institutes of Health (NIH)-sponsored screening centers provide academic researchers with a special opportunity to pursue small-molecule probes for protein targets that are outside the current interest of, or beyond the standard technologies employed by, the pharmaceutical industry. Here, we describe the outcome of an inhibitor screen for one such target, the enzyme protein phosphatase methylesterase-1 (PME-1), which regulates the methylesterification state of protein phosphatase 2A (PP2A) and is implicated in cancer and neurodegeneration. Inhibitors of PME-1 have not yet been described, which we attribute, at least in part, to a dearth of substrate assays compatible with high-throughput screening. We show that PME-1 is assayable by fluorescence polarization-activity-based protein profiling (fluopol-ABPP) and use this platform to screen the 300,000+ member NIH small-molecule library. This screen identified an unusual class of compounds, the aza-β-lactams (ABLs), as potent (IC(50) values of approximately 10 nM), covalent PME-1 inhibitors. Interestingly, ABLs did not derive from a commercial vendor but rather an academic contribution to the public library. We show using competitive-ABPP that ABLs are exquisitely selective for PME-1 in living cells and mice, where enzyme inactivation leads to substantial reductions in demethylated PP2A. In summary, we have combined advanced synthetic and chemoproteomic methods to discover a class of ABL inhibitors that can be used to selectively perturb PME-1 activity in diverse biological systems. More generally, these results illustrate how public screening centers can serve as hubs to create spontaneous collaborative opportunities between synthetic chemistry and chemical biology labs interested in creating first-in-class pharmacological probes for challenging protein targets.

Indexed as

Enzyme InhibitorsAnimalsCarboxylic Ester HydrolasesDrug Evaluation, PreclinicalHEK293 CellsHumansMiceMice, KnockoutNational Institutes of Health (U.S.)Protein Phosphatase 2United StatesCarboxylic Ester HydrolasesEnzyme InhibitorsProtein Phosphatase 2protein phosphatase methylesterase-1

Identifiers

PMID21398589
PMCPMC3084096
OpenAlexW2005418171

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.