Evidence map›Paper›PMID 21393864›Full record

ArticleThe Journal of clinical investigation2011

Cumulative mechanisms of lymphoid tissue fibrosis and T cell depletion in HIV-1 and SIV infections.

Ming Zeng, Anthony J Smith, Stephen W Wietgrefe, Peter J Southern, Timothy W Schacker, Cavan S Reilly, Jacob D Estes, Gregory F Burton, Guido Silvestri, Jeffrey D Lifson and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 202 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
202citing papers in PubMed, 3 pooled it
13.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

202 citing papers in PubMed, 3 syntheses or guidelines pooled it, 300 citations in OpenAlex.

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  3. The Hitchhiker Guide to CD4Frontiers in immunology · 2021
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142 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 1 country.

Ming ZengDepartment of Microbiology, Medical School, University of Minnesota, Minneapolis, Minnesota 55455, USA.
Anthony J Smith
Stephen W Wietgrefe
Peter J Southern
Timothy W Schacker
Cavan S Reilly
Jacob D Estes
Gregory F Burton
Guido Silvestri
Jeffrey D Lifson
John V Carlis
Ashley T Haase
Pancreatic Cancer Action Network · USUniversity of Minnesota Medical Center · USBrigham Young University · USCancer Research And Biostatistics · USEmory University · USUniversity of Minnesota · US

Funding

Virological Measurements of Cryptic ReplicationP01AI074340 · NIAID · UNIVERSITY OF MINNESOTA · PI SCHACKER, TIMOTHY W · 2008 to 2012
$12.1M
PATHOGENESIS OF HIV-INDUCED IMMUNODEFICIENCYR37AI028246 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI HAASE, ASHLEY T. · 1989 to 2008
$3.3M
PATHOGENESIS OF MUCOSAL TRANSMISSION/ACUTE SIV INFECTIONR01AI048484 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI HAASE, ASHLEY T. · 2000 to 2003
$3.2M
Functional Genomic Analysis of HIV-1 Infection in Lymphatic TissuesR01AI056997 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI HAASE, ASHLEY T. · 2004 to 2008
$3.0M
Damage to the Lymphoid Niche &Timing of HIV TherapyR01AI054232 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI SCHACKER, TIMOTHY W · 2003 to 2007
$2.4M
CCR NIH HHS HHSN261200800001CNCI NIH HHS HHSN261200800001ENIAID NIH HHS AI028246NIAID NIH HHS AI048484NIAID NIH HHS AI056997NIAID NIH HHS P01 AI074340NIAID NIH HHS R01 AI048484NIAID NIH HHS R01 AI054232NIAID NIH HHS R01 AI056997NIAID NIH HHS R37 AI028246
6 · The paper itself

Abstract

The hallmark of HIV-1 and SIV infections is CD4(+) T cell depletion. Both direct cell killing and indirect mechanisms related to immune activation have been suggested to cause the depletion of T cells. We have now identified a mechanism by which immune activation-induced fibrosis of lymphoid tissues leads to depletion of naive T cells in HIV-1 infected patients and SIV-infected rhesus macaques. The T regulatory cell response to immune activation increased procollagen production and subsequent deposition as fibrils via the TGF-β1 signaling pathway and chitinase 3-like-1 activity in fibroblasts in lymphoid tissues from patients infected with HIV-1. Collagen deposition restricted T cell access to the survival factor IL-7 on the fibroblastic reticular cell (FRC) network, resulting in apoptosis and depletion of T cells, which, in turn, removed a major source of lymphotoxin-β, a survival factor for FRCs during SIV infection in rhesus macaques. The resulting loss of FRCs and the loss of IL-7 produced by FRCs may thus perpetuate a vicious cycle of depletion of T cells and the FRC network. Because this process is cumulative, early treatment and antifibrotic therapies may offer approaches to moderate T cell depletion and improve immune reconstitution during HIV-1 infection.

Indexed as

AdipokinesAnimalsCD4-Positive T-LymphocytesChitinase-3-Like Protein 1FibroblastsGlycoproteinsHIV-1HIV InfectionsHumansInterleukin-7LectinsLymphocytesMacaca mulattaRetroviridae InfectionsSignal TransductionSimian Immunodeficiency VirusAdipokinesCHI3L1 protein, humanChitinase-3-Like Protein 1GlycoproteinsInterleukin-7LectinsTransforming Growth Factor beta1

Identifiers

PMID21393864
PMCPMC3049394
OpenAlexW2110938611

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.