Evidence map›Paper›PMID 21390319›Full record

ArticlePloS one2011

Apolipoprotein M gene (APOM) polymorphism modifies metabolic and disease traits in type 2 diabetes.

Jun-Wei Zhou, Stephen K W Tsui, Maggie C Y Ng, Hua Geng, Sai-Kam Li, Wing-Yee So, Ronald C Ma, Ying Wang, Qian Tao, Zhen-Yu Chen and 2 more

Abstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Apolipoprotein M gene polymorphisms in childhood-onset type 1 diabetes in southern Brazil.International journal of biochemistry and molecular biology · 2023
    Article
  4. The FoxOs are in the ApoM house.The Journal of clinical investigation · 2022
    Article
  5. Review
  6. Review
  7. Article
  8. Changes in inflammatory factors in SV40MES13 mesangial cells after silencing ApoM gene.International journal of clinical and experimental pathology · 2020
    Article
  9. Article
  10. Evaluation of Expression Level of Apolipoprotein M as a Diagnostic Marker for Primary Venous Thromboembolism.Clinical and applied thrombosis/hemostasis : official journal of the International Academy of Clinical and Applied Thrombosis/Hemostasis · 2018
    Article
  11. Sphingosine 1-Phosphate and Atherosclerosis.Journal of atherosclerosis and thrombosis · 2018
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Jun-Wei ZhouDepartment of Biochemistry, The Chinese University of Hong Kong, Hong Kong, China.
Stephen K W Tsui
Maggie C Y Ng
Hua Geng
Sai-Kam Li
Wing-Yee So
Ronald C Ma
Ying Wang
Qian Tao
Zhen-Yu Chen
Juliana C N Chan
Yuan-Yuan Ho

Funding

Genetic Analysis: Psychiatric and Other Complex DiseasesT32MH065213 · NIMH · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI WEISSMAN, MYRNA M · 2002 to 2011
$1.7M
NIMH NIH HHS T32 MH065213NIMH NIH HHS T32-MH-65213
6 · The paper itself

Abstract

This study aimed at substantiating the associations of the apolipoproein M gene (APOM) with type 2 diabetes (T2D) as well as with metabolic traits in Hong Kong Chinese. In addition, APOM gene function was further characterized to elucidate its activity in cholesterol metabolism. Seventeen APOM SNPs documented in the NCBI database were genotyped. Five SNPs were confirmed in our study cohort of 1234 T2D and 606 control participants. Three of the five SNPs rs707921(C+1871A), rs707922(G+1837T) and rs805264(G+203A) were in linkage disequilibrium (LD). We chose rs707922 to tag this LD region for down stream association analyses and characterized the function of this SNP at molecular level. No association between APOM and T2D susceptibility was detected in our Hong Kong Chinese cohort. Interestingly, the C allele of rs805297 was significantly associated with T2D duration of longer than 10 years (OR = 1.245, p = 0.015). The rs707922 TT genotype was significantly associated with elevated plasma total- and LDL- cholesterol levels (p = 0.006 and p = 0.009, respectively) in T2D patients. Molecular analyses of rs707922 lead to the discoveries of a novel transcript APOM5 as well as the cryptic nature of exon 5 of the gene. Ectopic expression of APOM5 transcript confirmed rs707922 allele-dependent activity of the transcript in modifying cholesterol homeostasis in vitro. In conclusion, the results here did not support APOM as a T2D susceptibility gene in Hong Kong Chinese. However, in T2D patients, a subset of APOM SNPs was associated with disease duration and metabolic traits. Further molecular analysis proved the functional activity of rs707922 in APOM expression and in regulation of cellular cholesterol content.

Indexed as

Polymorphism, Single NucleotideAdultAgedApolipoproteinsApolipoproteins MAsian PeopleCase-Control StudiesCohort StudiesDiabetes Mellitus, Type 2FemaleGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansLinkage DisequilibriumLipocalinsApolipoproteinsApolipoproteins MAPOM protein, humanLipocalins

Identifiers

PMID21390319
PMCPMC3044746

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.