Evidence map›Paper›PMID 21390126›Full record

ArticleNature2011

Inactivating mutations of acetyltransferase genes in B-cell lymphoma.

Laura Pasqualucci, David Dominguez-Sola, Annalisa Chiarenza, Giulia Fabbri, Adina Grunn, Vladimir Trifonov, Lawryn H Kasper, Stephanie Lerach, Hongyan Tang, Jing Ma and 8 more

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Nature, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02733380 (The Efficacy and Safety of Chidamide Combined With VDDT Regimen(Vinorelbine,Liposomal Doxorubicin,Dexamethasone and Thalidomide) in Relapse and Refractory Patients With Diffuse Large B Cell Lymphoma), which is not on this map. Cited by 528 papers.

0numbers the graph read from it
0cells of the map it votes in
528citing papers in PubMed
32.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02733380 phase2unknown statusnot on this mapstarted 2016, after this paper: background citation

The Efficacy and Safety of Chidamide Combined With VDDT Regimen(Vinorelbine,Liposomal Doxorubicin,Dexamethasone and Thalidomide) in Relapse and Refractory Patients With Diffuse Large B Cell Lymphoma

TypeinterventionalSponsorHenan Cancer HospitalRan2016 to 2021Enrolled20ConditionsDiffuse Large B-cell LymphomaArmsChidamide, Vinorelbine, Liposomal Doxorubicin or mitoxantrone, Dexamethasone, Thalidomide
3 · Its place in the literature

Who cites it

528 citing papers in PubMed, 928 citations in OpenAlex.

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  6. Structural and functional divergence of cancer hotspot mutations in CREBBP.Proceedings of the National Academy of Sciences of the United States of America · 2026
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468 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 2 countries.

Laura PasqualucciInstitute for Cancer Genetics, Herbert Irving Comprehensive Cancer Center, Columbia University, New York, New York 10032, USA. lp171@columbia.edu
David Dominguez-Sola
Annalisa Chiarenza
Giulia Fabbri
Adina Grunn
Vladimir Trifonov
Lawryn H Kasper
Stephanie Lerach
Hongyan Tang
Jing Ma
Davide Rossi
Amy Chadburn
Vundavalli V Murty
Charles G Mullighan
Gianluca Gaidano
Raul Rabadan
Paul K Brindle
Riccardo Dalla-Favera
Cancer Genetics (United States) · USSt. Jude Children's Research Hospital · USColumbia University · USUniversità degli Studi del Piemonte Orientale “Amedeo Avogadro” · ITNorthwestern University · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
Viral Pathogenesis and TherapeuticsU54AI057158 · NIAID · WADSWORTH CENTER · PI LEVY, DAVID E · 2003 to 2014
$100.8M
The Role of BCL-6 in Berminal Center FormationP01CA092625 · NCI · DANA-FARBER CANCER INSTITUTE · PI SHIPP, MARGARET A · 2001 to 2011
$32.9M
AIDS-ASSOCIATED LYMPHOPROLIFERATIVE DISORDERS/MOLEC BIOR37CA037295 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI DALLA-FAVERA, RICCARDO · 1989 to 2011
$4.1M
Integrated discovery and hypothesis testing of new associations in rare diseasesR01LM010140 · NLM · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI RABADAN, RAUL · 2009 to 2010
$1.1M
AIDS ASSOCIATED LYMPHOPROLIFERATIVE DISORDERSR01CA037295 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI DALLA-FAVERA, RICCARDO · 1997 to 2001
$705k
Analysis of craniofacial transcription factor and coactivator functional networksR21DE018183 · NIDCR · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI BRINDLE, PAUL K · 2008 to 2009
$462k
NCI NIH HHS P01 CA092625NCI NIH HHS P01-CA092625NCI NIH HHS P30 CA021765NCI NIH HHS R01 CA037295NCI NIH HHS R01-CA37295NCI NIH HHS R37 CA037295NIAID NIH HHS U54 AI057158NIAID NIH HHS U54-AI057158NIDCR NIH HHS DE018183NIDCR NIH HHS R21 DE018183NLM NIH HHS 1R01LM010140-01NLM NIH HHS R01 LM010140
6 · The paper itself

Abstract

B-cell non-Hodgkin's lymphoma comprises biologically and clinically distinct diseases the pathogenesis of which is associated with genetic lesions affecting oncogenes and tumour-suppressor genes. We report here that the two most common types--follicular lymphoma and diffuse large B-cell lymphoma--harbour frequent structural alterations inactivating CREBBP and, more rarely, EP300, two highly related histone and non-histone acetyltransferases (HATs) that act as transcriptional co-activators in multiple signalling pathways. Overall, about 39% of diffuse large B-cell lymphoma and 41% of follicular lymphoma cases display genomic deletions and/or somatic mutations that remove or inactivate the HAT coding domain of these two genes. These lesions usually affect one allele, suggesting that reduction in HAT dosage is important for lymphomagenesis. We demonstrate specific defects in acetylation-mediated inactivation of the BCL6 oncoprotein and activation of the p53 tumour suppressor. These results identify CREBBP/EP300 mutations as a major pathogenetic mechanism shared by common forms of B-cell non-Hodgkin's lymphoma, with direct implications for the use of drugs targeting acetylation/deacetylation mechanisms.

Indexed as

AcetylationAcetyl Coenzyme AAcetyltransferasesAnimalsBase SequenceCells, CulturedCREB-Binding ProteinDNA-Binding ProteinsE1A-Associated p300 ProteinGene Expression Regulation, NeoplasticHEK293 CellsHistone AcetyltransferasesHumansLymphoma, B-CellLymphoma, FollicularLymphoma, Large B-Cell, DiffuseAcetyl Coenzyme AAcetyltransferasesBCL6 protein, humanCREB-Binding ProteinCREBBP protein, humanDNA-Binding ProteinsE1A-Associated p300 ProteinEP300 protein, humanHistone AcetyltransferasesProto-Oncogene Proteins c-bcl-6Tumor Suppressor Protein p53

Identifiers

PMID21390126
PMCPMC3271441
OpenAlexW2044352858

What OpenQuestion holds

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Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.