Evidence map›Paper›PMID 21384928›Full record

ArticleJournal of agricultural and food chemistry2011

N-linked glycan profiling of mature human milk by high-performance microfluidic chip liquid chromatography time-of-flight tandem mass spectrometry.

David C Dallas, William F Martin, John S Strum, Angela M Zivkovic, Jennifer T Smilowitz, Mark A Underwood, Michael Affolter, Carlito B Lebrilla, J Bruce German

Registry-linked trialAbstract read
In one paragraph

Article in Journal of agricultural and food chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT01817127 (Functional Deconstruction of Human Milk Oligosaccharides and Lipids), which is not on this map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01817127 active not recruitingnot on this map

Functional Deconstruction of Human Milk Oligosaccharides and Lipids

TypeobservationalSponsorUniversity of California, DavisRan2009 to 2028Enrolled395ConditionsHealthy, Gestational Diabetes Mellitus, Type 2 Diabetes Mellitus
3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 59 citations in OpenAlex.

  1. Identification and comparison ofFood chemistry: X · 2025
    Article
  2. Label-Free Liquid Chromatography-Mass Spectrometry Quantitation of RelativeInternational journal of molecular sciences · 2024
    Article
  3. Review
  4. Article
  5. Potential Applications of Endo-β-Frontiers in nutrition · 2021
    Review
  6. Serum Protein N-Glycans in Colostrum and Mature Milk of Chinese Mothers.Journal of agricultural and food chemistry · 2020
    Article
  7. Quantitative Longitudinal Inventory of theJournal of proteome research · 2020
    Article
  8. Review
  9. NIH workshop on human milk composition: summary and visions.The American journal of clinical nutrition · 2019
    Article
  10. Article
  11. Article
  12. Article
  13. Serum glycan signatures of gastric cancer.Cancer prevention research (Philadelphia, Pa.) · 2014
    Article
  14. Article
  15. Review
  16. Review
  17. Structural glycomic analyses at high sensitivity: a decade of progress.Annual review of analytical chemistry (Palo Alto, Calif.) · 2013
    Review
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

David C DallasDepartment of Food Science, University of California at Davis, Davis, California 95616, United States.
William F Martin
John S Strum
Angela M Zivkovic
Jennifer T Smilowitz
Mark A Underwood
Michael Affolter
Carlito B Lebrilla
J Bruce German
University of California, Davis · USNestlé (Switzerland) · CHInstitute of Molecular Medicine · IN

Funding

Workshop on Environmental Technology Transfer and EntrepreneurshipP42ES004699 · NIEHS · UNIVERSITY OF CALIFORNIA DAVIS · PI HAMMOCK, BRUCE D · 1987 to 2021
$50.1M
UC Davis Center for Children's Environmental Health (CCEH)P01ES011269 · NIEHS · UNIVERSITY OF CALIFORNIA DAVIS · PI VAN DE WATER, JUDY A. · 2001 to 2018
$12.5M
HYDROLYTIC ENZYMES IN THE METABOLISM OF TOXINSR01ES002710 · NIEHS · UNIVERSITY OF CALIFORNIA DAVIS · PI HAMMOCK, BRUCE D · 1985 to 2018
$4.0M
Training Program in Biomolecular TechnologyT32GM008799 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI LEACH, J. KENT · 2002 to 2016
$2.4M
Structures, Functions, & Genetic Diversity of Oligosaccharides in MilkR01HD061923 · NICHD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI LEBRILLA, CARLITO B · 2009 to 2013
$1.6M
NICHD NIH HHS R01 HD061923NIEHS NIH HHS P01 ES011269NIEHS NIH HHS P42 ES004699NIEHS NIH HHS R01 ES002710NIGMS NIH HHS T32 GM008799
6 · The paper itself

Abstract

N-Linked glycans of skim human milk proteins were determined for three mothers. N-Linked glycans are linked to immune defense, cell growth, and cell-cell adhesion, but their functions in human milk are undetermined. Protein-bound N-linked glycans were released with peptidyl N-glycosidase F (PNGase F), enriched by graphitized carbon chromatography, and analyzed with Chip-TOF MS. To be defined as N-glycans, compounds were required, in all three procedural replicates, to match, within 6 ppm, against a theoretical human N-glycan library and be at least 2-fold higher in abundance in PNGase F-treated than in control samples. Fifty-two N-linked glycan compositions were identified, and 24 were confirmed via tandem mass spectra analysis. Twenty-seven compositions have been found previously in human milk, and 25 are novel compositions. By abundance, 84% of N-glycans were fucosylated and 47% were sialylated. The majority (70%) of total N-glycan abundance was composed of N-glycans found in all three milk samples.

Indexed as

Chromatography, High Pressure LiquidHumansMass SpectrometryMicrofluidicsMilk, HumanPolysaccharidesPolysaccharides

Identifiers

PMID21384928
PMCPMC4422756
OpenAlexW2032734091

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.