Evidence map›Paper›PMID 21379321›Full record

ArticlePLoS genetics2011

Mapping of the disease locus and identification of ADAMTS10 as a candidate gene in a canine model of primary open angle glaucoma.

John Kuchtey, Lana M Olson, Tommy Rinkoski, Edward O Mackay, T M Iverson, Kirk N Gelatt, Jonathan L Haines, Rachel W Kuchtey

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed, 1 pooled it
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 1 synthesis or guideline pooled it, 110 citations in OpenAlex.

  1. Pooled it
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  14. Ocular pulse amplitude (OPA) in canineFrontiers in bioengineering and biotechnology · 2023
    Article
  15. Article
  16. Article
  17. Optic neuropathy associated with TGFβ dysregulation in mice with a glaucoma-causative mutation of ADAMTS10.Matrix biology : journal of the International Society for Matrix Biology · 2022
    Article
  18. Article
  19. Article
  20. Adamts10 controls transforming growth factorFrontiers in molecular biosciences · 2022
    Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

John KuchteyVanderbilt Eye Institute, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America. rachel.kuchtey@vanderbilt.edu
Lana M Olson
Tommy Rinkoski
Edward O Mackay
T M Iverson
Kirk N Gelatt
Jonathan L Haines
Rachel W Kuchtey
University of Florida · USVanderbilt University · USVanderbilt University Medical Center · USCenter for Human Genetics · US

Funding

Shop Module CoreP30EY008126 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Kevin L Schey · 1989 to 2026
$19.6M
Targeting Tissue Biomechanics for Treatment of GlaucomaR01EY020894 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI KUCHTEY, RACHEL W · 2010 to 2025
$6.4M
Complexities of complex II: A versatile architecture for respirationR01GM079419 · NIGMS · VANDERBILT UNIVERSITY · PI IVERSON, T M · 2007 to 2011
$1.3M
Transition states in G-protein coupled receptor signalingR21EY018435 · NEI · VANDERBILT UNIVERSITY · PI IVERSON, T M · 2009 to 2010
$415k
NEI NIH HHS EY018435NEI NIH HHS P30 EY008126NEI NIH HHS P30-EY008126NEI NIH HHS R01 EY020894NEI NIH HHS R01EY020894NEI NIH HHS R21 EY018435NIGMS NIH HHS R01 GM079419
6 · The paper itself

Abstract

Primary open angle glaucoma (POAG) is a leading cause of blindness worldwide, with elevated intraocular pressure as an important risk factor. Increased resistance to outflow of aqueous humor through the trabecular meshwork causes elevated intraocular pressure, but the specific mechanisms are unknown. In this study, we used genome-wide SNP arrays to map the disease gene in a colony of Beagle dogs with inherited POAG to within a single 4 Mb locus on canine chromosome 20. The Beagle POAG locus is syntenic to a previously mapped human quantitative trait locus for intraocular pressure on human chromosome 19. Sequence capture and next-generation sequencing of the entire canine POAG locus revealed a total of 2,692 SNPs segregating with disease. Of the disease-segregating SNPs, 54 were within exons, 8 of which result in amino acid substitutions. The strongest candidate variant causes a glycine to arginine substitution in a highly conserved region of the metalloproteinase ADAMTS10. Western blotting revealed ADAMTS10 protein is preferentially expressed in the trabecular meshwork, supporting an effect of the variant specific to aqueous humor outflow. The Gly661Arg variant in ADAMTS10 found in the POAG Beagles suggests that altered processing of extracellular matrix and/or defects in microfibril structure or function may be involved in raising intraocular pressure, offering specific biochemical targets for future research and treatment strategies.

Indexed as

Chromosome MappingGenetic Association StudiesADAM ProteinsAmino Acid SequenceAnimalsBase SequenceChromosomes, MammalianDisease Models, AnimalDogsFemaleGenetic LinkageGenetic LociGenomeGlaucoma, Open-AngleHaplotypesHumansADAM Proteins

Identifiers

PMID21379321
PMCPMC3040645
OpenAlexW2090810024

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.