Evidence map›Paper›PMID 21378754›Full record

ArticleThe EMBO journal2011

A structural basis for Lowe syndrome caused by mutations in the Rab-binding domain of OCRL1.

Xiaomin Hou, Nina Hagemann, Stefan Schoebel, Wulf Blankenfeldt, Roger S Goody, Kai S Erdmann, Aymelt Itzen

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 98 citations in OpenAlex.

  1. Article
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  6. Review
  7. Phosphoinositides in New Spaces.Cold Spring Harbor perspectives in biology · 2023
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  10. A combinedCell cycle (Georgetown, Tex.) · 2022
    Article
  11. Article
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  19. Rab8a localisation and activation by Toll-like receptors on macrophage macropinosomes.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2019
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Xiaomin HouDepartment of Physical Biochemistry, Max-Planck-Institute of Molecular Physiology, Dortmund, Germany.
Nina Hagemann
Stefan Schoebel
Wulf Blankenfeldt
Roger S Goody
Kai S Erdmann
Aymelt Itzen
Max Planck Institute of Molecular Physiology · DERuhr University Bochum · DEMax Planck Society · DEUniversity of Bayreuth · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The oculocerebrorenal syndrome of Lowe (OCRL), also called Lowe syndrome, is characterized by defects of the nervous system, the eye and the kidney. Lowe syndrome is a monogenetic X-linked disease caused by mutations of the inositol-5-phosphatase OCRL1. OCRL1 is a membrane-bound protein recruited to membranes via interaction with a variety of Rab proteins. The structural and kinetic basis of OCRL1 for the recognition of several Rab proteins is unknown. In this study, we report the crystal structure of the Rab-binding domain (RBD) of OCRL1 in complex with Rab8a and the kinetic binding analysis of OCRL1 with several Rab GTPases (Rab1b, Rab5a, Rab6a and Rab8a). In contrast to other effectors that bind their respective Rab predominantly via α-helical structure elements, the Rab-binding interface of OCRL1 consists mainly of the IgG-like β-strand structure of the ASPM-SPD-2-Hydin domain as well as one α-helix. Our results give a deeper structural understanding of disease-causing mutations of OCRL1 affecting Rab binding.

Indexed as

Cell MembraneCrystallizationCrystallography, X-RayFluorescent Antibody TechniqueHumansImmunoprecipitationMutationOculocerebrorenal SyndromePhosphoric Monoester HydrolasesProtein ConformationProtein Structure, Tertiaryrab GTP-Binding ProteinsOCRL protein, humanPhosphoric Monoester HydrolasesRAB8A protein, humanrab GTP-Binding Proteins

Identifiers

PMID21378754
PMCPMC3102282
OpenAlexW2135727668

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.