Evidence map›Paper›PMID 21368318›Full record

ArticleMolecular biology and evolution2011

Patterns of genetic variation within and between Gibbon species.

Sung K Kim, Lucia Carbone, Celine Becquet, Alan R Mootnick, David Jiang Li, Pieter J de Jong, Jeffrey D Wall

Open access · bronzeAbstract read
In one paragraph

Article in Molecular biology and evolution, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 47 citations in OpenAlex.

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  6. Hominoid intraspecific cranial variation mirrors neutral genetic diversity.Proceedings of the National Academy of Sciences of the United States of America · 2018
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  15. An Alu-based phylogeny of gibbons (hylobatidae).Molecular biology and evolution · 2012
    Article
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  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Sung K KimInstitute for Human Genetics, University of California San Francisco, CA, USA.
Lucia Carbone
Celine Becquet
Alan R Mootnick
David Jiang Li
Pieter J de Jong
Jeffrey D Wall
University of California, San Francisco · USMarine Conservation Institute · USOregon Health & Science University · US

Funding

Genomic Patterns of Polymorphism in PrimatesR01HG005226 · NHGRI · UNIVERSITY OF ARIZONA · PI HAMMER, MICHAEL F, WALL, JEFFREY D · 2010 to 2012
$1.7M
NHGRI NIH HHS R01 HG005226
6 · The paper itself

Abstract

Gibbons are small, arboreal, highly endangered apes that are understudied compared with other hominoids. At present, there are four recognized genera and approximately 17 species, all likely to have diverged from each other within the last 5-6 My. Although the gibbon phylogeny has been investigated using various approaches (i.e., vocalization, morphology, mitochondrial DNA, karyotype, etc.), the precise taxonomic relationships are still highly debated. Here, we present the first survey of nuclear sequence variation within and between gibbon species with the goal of estimating basic population genetic parameters. We gathered ~60 kb of sequence data from a panel of 19 gibbons representing nine species and all four genera. We observe high levels of nucleotide diversity within species, indicative of large historical population sizes. In addition, we find low levels of genetic differentiation between species within a genus comparable to what has been estimated for human populations. This is likely due to ongoing or episodic gene flow between species, and we estimate a migration rate between Nomascus leucogenys and N. gabriellae of roughly one migrant every two generations. Together, our findings suggest that gibbons have had a complex demographic history involving hybridization or mixing between diverged populations.

Indexed as

AnimalsCell LineGene FlowGenetic LinkageGenetic VariationHylobatesMutationPhenotypePhylogeny

Identifiers

PMID21368318
PMCPMC3144381
OpenAlexW2095378445

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.