Evidence map›Paper›PMID 21364536›Full record

ArticleMolecular therapy : the journal of the American Society of Gene Therapy2011

Lentiviral vector integration profiles differ in rodent postmitotic tissues.

Cynthia C Bartholomae, Anne Arens, Kamaljit S Balaggan, Rafael J Yáñez-Muñoz, Eugenio Montini, Steven J Howe, Anna Paruzynski, Bernhard Korn, Jens Uwe Appelt, Angus Macneil and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular therapy : the journal of the American Society of Gene Therapy, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 54 citations in OpenAlex.

  1. Review
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  4. Review
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  6. Article
  7. Review
  8. Article
  9. Analyzing the Genotoxicity of Retroviral Vectors in Hematopoietic Cell Gene Therapy.Molecular therapy. Methods & clinical development · 2018
    Review
  10. Review
  11. Article
  12. Article
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  15. Article
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  17. Review
  18. Vector platforms for gene therapy of inherited retinopathies.Progress in retinal and eye research · 2014
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 7 institutions in 3 countries.

Cynthia C BartholomaeDepartment of Translational Oncology, National Center for Tumor Diseases (NCT) and German Cancer Research Center (DKFZ), Heidelberg, Germany.
Anne Arens
Kamaljit S Balaggan
Rafael J Yáñez-Muñoz
Eugenio Montini
Steven J Howe
Anna Paruzynski
Bernhard Korn
Jens Uwe Appelt
Angus Macneil
Daniela Cesana
Ulrich Abel
Hanno Glimm
Luigi Naldini
Robin R Ali
Adrian J Thrasher
Christof von Kalle
Manfred Schmidt
University College London · GBHeidelberg University · DENational Center for Tumor Diseases · DEThe San Raffaele Telethon Institute for Gene Therapy · ITGerman Cancer Research Center · DEInstitute of Molecular Biology · DERoyal Holloway University of London · GB

Funding

Telethon TGT06E02Wellcome Trust 090233
6 · The paper itself

Abstract

Lentiviral vectors with self-inactivating (SIN) long terminal repeats (LTRs) are promising for safe and sustained transgene expression in dividing as well as quiescent cells. As genome organization and transcription substantially differs between actively dividing and postmitotic cells in vivo, we hypothesized that genomic vector integration preferences might be distinct between these biological states. We performed integration site (IS) analyses on mouse dividing cells (fibroblasts and hematopoietic progenitor cells (HPCs)) transduced ex vivo and postmitotic cells (eye and brain) transduced in vivo. As expected, integration in dividing cells occurred preferably into gene coding regions. In contrast, postmitotic cells showed a close to random frequency of integration into genes and gene spare long interspersed nuclear elements (LINE). Our studies on the potential mechanisms responsible for the detected differences of lentiviral integration suggest that the lowered expression level of Psip1 reduce the integration frequency in vivo into gene coding regions in postmitotic cells. The motif TGGAA might represent one of the factors for preferred lentiviral integration into mouse and rat Satellite DNA. These observations are highly relevant for the correct assessment of preclinical biosafety studies, indicating that lentiviral vectors are well suited for safe and effective clinical gene transfer into postmitotic tissues.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsCell LineDNA, SatelliteFemaleGenetic VectorsLentivirusMiceMice, Inbred BALB CMitosisPolymerase Chain ReactionRatsTerminal Repeat SequencesTranscription FactorsVirus IntegrationAdaptor Proteins, Signal TransducingDNA, SatellitePsip1 protein, mouseTranscription Factors

Identifiers

PMID21364536
PMCPMC3070105
OpenAlexW1972106091

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.