Evidence map›Paper›PMID 21361320›Full record

ArticleJournal of the American Chemical Society2011

Spin diffusion driven by R-symmetry sequences: applications to homonuclear correlation spectroscopy in MAS NMR of biological and organic solids.

Guangjin Hou, Si Yan, Shangjin Sun, Yun Han, In-Ja L Byeon, Jinwoo Ahn, Jason Concel, Ago Samoson, Angela M Gronenborn, Tatyana Polenova

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

  1. Article
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  3. Membrane-induced tau amyloid fibrils.Communications biology · 2023
    Article
  4. Great Offset Difference Internuclear Selective Transfer.The journal of physical chemistry letters · 2023
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  5. Review
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  7. Article
  8. Review
  9. Dynamic nuclear polarization-enhanced, double-quantum filteredJournal of magnetic resonance (San Diego, Calif. : 1997) · 2022
    Article
  10. Review
  11. Heteronuclear and homonuclear radio-frequency-driven recoupling.Magnetic resonance (Gottingen, Germany) · 2021
    Article
  12. Strategies for RNA Resonance Assignment byFrontiers in molecular biosciences · 2021
    Review
  13. Article
  14. Article
  15. Article
  16. New applications of solid-state NMR in structural biology.Emerging topics in life sciences · 2018
    Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Guangjin HouDepartment of Chemistry and Biochemistry, University of Delaware, Newark, Delaware 19716, United States.
Si Yan
Shangjin Sun
Yun Han
In-Ja L Byeon
Jinwoo Ahn
Jason Concel
Ago Samoson
Angela M Gronenborn
Tatyana Polenova

Funding

X-Ray Core P50GM082251 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ENGELMAN, ALAN N. · 2007 to 2018
$48.1M
TOWARDS SOLID-STATE NMR STRUCTURES OF GPCRSP20RR015588 · NCRR · UNIVERSITY OF DELAWARE · PI ROZOVSKY, SHARON · 2000 to 2009
$18.2M
UDE COBRE: STRAINED MOLECULES FOR SYNTHESIS OF UNNATURAL AMINO ACIDSP20RR017716 · NCRR · UNIVERSITY OF DELAWARE · PI BEEBE, THOMAS PAUL · 2002 to 2011
$16.9M
Structure and Dynamics of CAP-GLY: Microtubule Assemblies by Solid-State NMRR01GM085306 · NIGMS · UNIVERSITY OF DELAWARE · PI POLENOVA, TATYANA, WILLIAMS, JOHN CHARLES · 2010 to 2014
$1.4M
NCRR NIH HHS 5P20RR017716-07NCRR NIH HHS P20 RR015588NCRR NIH HHS P20RR015588-10NCRR NIH HHS P20 RR017716NIGMS NIH HHS P50 GM082251NIGMS NIH HHS P50GM082251-03NIGMS NIH HHS R01 GM085306NIGMS NIH HHS R01GM085396
6 · The paper itself

Abstract

We present a family of homonuclear (13)C-(13)C magic angle spinning spin diffusion experiments, based on R2(n)(v) (n = 1 and 2, v = 1 and 2) symmetry sequences. These experiments are well suited for (13)C-(13)C correlation spectroscopy in biological and organic systems and are especially advantageous at very fast MAS conditions, where conventional PDSD and DARR experiments fail. At very fast MAS frequencies the R2(1)(1), R2(2)(1), and R2(2)(2) sequences result in excellent quality correlation spectra both in model compounds and in proteins. Under these conditions, individual R2(n)(v) display different polarization transfer efficiency dependencies on isotropic chemical shift differences: R2(2)(1) recouples efficiently both small and large chemical shift differences (in proteins these correspond to aliphatic-to-aliphatic and carbonyl-to-aliphatic correlations, respectively), while R2(1)(1) and R2(2)(2) exhibit the maximum recoupling efficiency for the aliphatic-to-aliphatic or carbonyl-to-aliphatic correlations, respectively. At moderate MAS frequencies (10-20 kHz), all R2(n)(v) sequences introduced in this work display similar transfer efficiencies, and their performance is very similar to that of PDSD and DARR. Polarization transfer dynamics and chemical shift dependencies of these R2-driven spin diffusion (RDSD) schemes are experimentally evaluated and investigated by numerical simulations for [U-(13)C,(15)N]-alanine and the [U-(13)C,(15)N] N-formyl-Met-Leu-Phe (MLF) tripeptide. Further applications of this approach are illustrated for several proteins: spherical assemblies of HIV-1 U-(13)C,(15)N CA protein, U-(13)C,(15)N-enriched dynein light chain DLC8, and sparsely (13)C/uniformly (15)N enriched CAP-Gly domain of dynactin. Due to the excellent performance and ease of implementation, the presented R2(n)(v) symmetry sequences are expected to be of wide applicability in studies of proteins and protein assemblies as well as other organic solids by MAS NMR spectroscopy.

Indexed as

Magnetic Resonance SpectroscopyOrganic ChemicalsProteinsOrganic ChemicalsProteins

Identifiers

PMID21361320
PMCPMC3148607

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.