Evidence map›Paper›PMID 21359685›Full record

ArticlePathology oncology research : POR2011

Detection of APC gene deletions in colorectal malignancies using quantitative PCR in a Chinese population.

Zhengyu Fang, Yi Xiong, Jiana Li, Li Liu, Manhui Li, Wei Zhang, Lei Shi, Jun Wan

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Pathology oncology research : POR, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. [Copy number aberrations of genes related to extrohepatic metastasis-free survival after operation for hepatocellular carcinoma].Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology · 2017
    Article
  3. Article
  4. Review
  5. APC gene deletions in gastric adenocarcinomas in a Chinese population: a correlation with tumour progression.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2012
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Zhengyu FangBiomedical Research Institute, Shenzhen-PKU-HKUST Medical Center, Shenzhen, People's Republic of China.
Yi Xiong
Jiana Li
Li Liu
Manhui Li
Wei Zhang
Lei Shi
Jun Wan
HKUST Shenzhen Research Institute · CNHong Kong University of Science and Technology · HKGuangdong-Hongkong-Macau Joint Laboratory of Collaborative Innovation for Environmental Quality · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The adenomatous polyposis coli (APC) gene has been shown to be involved in genetic instability and to be downregluated in several human carcinomas. The chromosome locus of APC, 5q21-22, is frequently deleted in colorectal cancers (CRCs). The functional impact of such regions needs to be extensively investigated in large amount of clinical samples. Case-matched tissues of CRC and adjacent normal epithelium (n = 134) were included in this study. Quantitative PCR was carried out to examine the copy number as well as mRNA expression of APC gene in colorectal malignancies. Our results showed that copy number deletions of APC were present in a relatively high percentage of colorectal cancer samples (26.1%, 35 out of 134). There was a positive correlation between copy number decrease of APC and tumor progression in CRCs. Furthermore, copy number loss of APC was correlated with decreased mRNA expression. However, mRNA levels of APC were also impaired in CRC samples with unaltered copy numbers, indicating that sporadic CRCs exhibit different mechanisms of APC regulation.

Indexed as

Gene DeletionAdenocarcinomaAdenocarcinoma, MucinousAdenomatous Polyposis Coli ProteinCase-Control StudiesColorectal NeoplasmsDNA Copy Number VariationsDNA, NeoplasmHumansNeoplasm StagingPrognosisReal-Time Polymerase Chain ReactionAdenomatous Polyposis Coli ProteinAPC protein, humanDNA, Neoplasm

Identifiers

PMID21359685
OpenAlexW2009925180

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.