Evidence map›Paper›PMID 21359680›Full record

ArticleMolecules and cells2011

Quantitative analysis of retromer complex-related genes during embryo development in the mouse.

Sang-Je Park, Jae-Won Huh, Young-Hyun Kim, Ji-Su Kim, Bong-Seok Song, Sang-Rae Lee, Sun-Uk Kim, Heui-Soo Kim, Kazuhiko Imakawa, Kyu-Tae Chang

Open access · bronzeAbstract read
In one paragraph

Article in Molecules and cells, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 86% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Sang-Je ParkNational Primate Research Center, Korea Research Institute of Bioscience and Biotechnology, Ochang 363-883, Korea.
Jae-Won Huh
Young-Hyun Kim
Ji-Su Kim
Bong-Seok Song
Sang-Rae Lee
Sun-Uk Kim
Heui-Soo Kim
Kazuhiko Imakawa
Kyu-Tae Chang
Korea Research Institute of Bioscience and Biotechnology · KRKorea University of Science and Technology · KRPusan National University · KRThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The retromer complex is a heteropentameric protein unit associated with retrograde transport of cargo proteins from endosomes to the trans-Golgi network. Functional silencing study of the Vps26a gene indicated the important role of the retromer complex during early developmental stages in the mouse. However, individual expression patterns and quantitative analysis of individual members of the retromer complex during the early developmental stages has not been investigated. In this study, we conducted quantitative expression analysis of six retromer complex genes (Vps26a, Vps26b, Vps29, Vps35, Snx1, and Snx2) and one related receptor gene (Ci-mpr) during the eleven embryonic stages with normal MEF (mouse embryonic fibroblast) and Vps26a(-/-) MEF cells. Remarkably, except for Vps26a (maternal expression pattern), all tested genes showed maternal-zygotic expression patterns. And five genes (Vps26b, Vps29, Vps35, Snx2, and Ci-mpr) showed a pattern of decreased expression in Vps26a(-/-) MEF cells by comparative analysis between normal MEF and Vps26a(-/-) MEF cells. However, the Snx1 gene showed a pattern of increased expression in Vps26a(-/-) MEF cells. From our results, we could assume that retromer complex-related genes have important roles during oocyte development. However, in the preimplantation stage, they did not have significant roles.

Indexed as

AnimalsBlastocystCarrier ProteinsEmbryonic DevelopmentEndosomesFemaleGene Expression Regulation, DevelopmentalHumansMaleMiceMice, Inbred C57BLOocytesPregnancyReverse Transcriptase Polymerase Chain Reactiontrans-Golgi NetworkVesicular Transport ProteinsCarrier ProteinsVesicular Transport ProteinsVps26 protein, mouseVPS29 protein, mouseVps35 protein, mouse

Identifiers

PMID21359680
PMCPMC3887610
OpenAlexW2094785270

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.