Evidence map›Paper›PMID 21357738›Full record

ArticleMolecular and cellular biology2011

Elongator protein 3b negatively regulates ribosomal DNA transcription in african trypanosomes.

Sam Alsford, David Horn

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Microbiology spectrum · 2026
    Article
  2. A systematic analysis ofGenome research · 2021
    Article
  3. Review
  4. Article
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  6. Review
  7. Article
  8. Review
  9. Nucleolar Division in the Promastigote Stage ofBioMed research international · 2018
    Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
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  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Sam AlsfordLondon School of Hygiene and Tropical Medicine, Keppel Street, London WC1E 7HT, United Kingdom.
David Horn

Funding

Wellcome Trust 079457Wellcome Trust 083648
6 · The paper itself

Abstract

Eukaryotic cells limit ribosomal DNA (rDNA) transcription by RNA polymerase I (RNAP-I) to maintain genome integrity. African trypanosomes present an excellent model for studies on RNAP-I regulation because they possess a bifunctional RNAP-I and because RNAP-II transcription appears unregulated. Since Elp3, the catalytic component of Elongator, controls RNAP-II transcription in yeast and human cells, we predicted a role for a trypanosome Elp3-related protein, ELP3a or ELP3b, in RNAP-I regulation. elp3b null and conditional strains specifically exhibited resistance to a transcription elongation inhibitor, suggesting that ELP3b negatively impacts elongation. Nascent RNA analysis and expression of integrated reporter cassettes supported this interpretation and revealed negative control of rDNA transcription. ELP3b specifically localized to the nucleolus, and ELP3b loss rendered cells hypersensitive to DNA damage and to translation inhibition, suggesting that anti-Elongator function was important to maintain genome integrity rather than to modulate ribosome production. Finally, ELP3b displayed discrimination between RNAP-I compartments in the same cell. Our results establish ELP3b as a major negative regulator of rDNA transcription and extend the roles of the Elp3-related proteins to RNAP-I transcription units. ELP3b is also the first trypanosome protein shown to distinguish between rDNA and variant surface glycoprotein transcription within different RNAP-I compartments.

Indexed as

Transcription, GeneticAmino Acid SequenceAnimalsDNA DamageDNA, ProtozoanDNA, RibosomalGene DeletionHistone AcetyltransferasesHumansMolecular Sequence DataMutationProtozoan ProteinsRNA Polymerase ISequence AlignmentTrypanosoma brucei bruceiTrypanosomiasis, AfricanDNA, ProtozoanDNA, RibosomalHistone AcetyltransferasesProtozoan ProteinsRNA Polymerase I

Identifiers

PMID21357738
PMCPMC3133226

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.