Evidence map›Paper›PMID 21357694›Full record

ArticleThe Journal of biological chemistry2011

Novel role of base excision repair in mediating cisplatin cytotoxicity.

Anbarasi Kothandapani, Venkata Srinivas Mohan Nimai Dangeti, Ashley R Brown, Lauren A Banze, Xiao-Hong Wang, Robert W Sobol, Steve M Patrick

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 86 citations in OpenAlex.

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  18. The DNA Cytosine Deaminase APOBEC3B is a Molecular Determinant of Platinum Responsiveness in Clear Cell Ovarian Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Anbarasi KothandapaniDepartment of Biochemistry and Cancer Biology, University of Toledo, Health Science Campus, Toledo, Ohio 43614, USA.
Venkata Srinivas Mohan Nimai Dangeti
Ashley R Brown
Lauren A Banze
Xiao-Hong Wang
Robert W Sobol
Steve M Patrick
University of Toledo · USUPMC Hillman Cancer Center · USUniversity of Pittsburgh · US

Funding

Novel approaches to enhance tumor cell cytotoxicity of alkylating agentsR01CA148629 · NCI · UNIVERSITY OF SOUTH ALABAMA · PI SOBOL, ROBERT W · 2010 to 2021
$3.4M
DNA repair deficient cells for analysisR44GM087798 · NIGMS · TREVIGEN, INC. · PI GEORGE, JAY, SOBOL, ROBERT W · 2010 to 2011
$2.5M
Novel Role of Base Excision Repair and Mismatch Repair in Cisplatin SensitivityR01GM088249 · NIGMS · WAYNE STATE UNIVERSITY · PI PATRICK, STEVE M · 2010 to 2014
$1.4M
Priority StageP20CA132385 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SOBOL, ROBERT W · 2007 to 2009
$465k
DNA repair deficient human cells for genomic variation analysisR43GM087798 · NIGMS · TREVIGEN, INC. · PI GEORGE, JAY, SOBOL, ROBERT W · 2009 to 2009
$200k
NCI NIH HHS CA132385NCI NIH HHS CA148629NCI NIH HHS P20 CA132385NCI NIH HHS R01 CA148629NIGMS NIH HHS 1R01-GM088249NIGMS NIH HHS GM087798NIGMS NIH HHS R01 GM088249NIGMS NIH HHS R43 GM087798NIGMS NIH HHS R44 GM087798
6 · The paper itself

Abstract

Using isogenic mouse embryonic fibroblasts and human cancer cell lines, we show that cells defective in base excision repair (BER) display a cisplatin-specific resistant phenotype. This was accompanied by enhanced repair of cisplatin interstrand cross-links (ICLs) and ICL-induced DNA double strand breaks, but not intrastrand adducts. Cisplatin induces abasic sites with a reduced accumulation in uracil DNA glycosylase (UNG) null cells. We show that cytosines that flank the cisplatin ICLs undergo preferential oxidative deamination in vitro, and AP endonuclease 1 (APE1) can cleave the resulting ICL DNA substrate following removal of the flanking uracil. We also show that DNA polymerase β has low fidelity at the cisplatin ICL site after APE1 incision. Down-regulating ERCC1-XPF in BER-deficient cells restored cisplatin sensitivity. Based on our results, we propose a novel model in which BER plays a positive role in maintaining cisplatin cytotoxicity by competing with the productive cisplatin ICL DNA repair pathways.

Indexed as

AnimalsAntineoplastic AgentsBinding SitesCell Line, TumorCisplatinCross-Linking ReagentsDNA AdductsDNA DamageDNA-Directed DNA PolymeraseDNA RepairDrug ResistanceHumansKineticsMiceUracil-DNA GlycosidaseAntineoplastic AgentsCisplatinCross-Linking ReagentsDNA AdductsDNA-Directed DNA PolymeraseUracil-DNA Glycosidase

Identifiers

PMID21357694
PMCPMC3077654
OpenAlexW2048143514

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.