Evidence map›Paper›PMID 21357490›Full record

ArticleThe Plant cell2011

The Arabidopsis D-type cyclin CYCD2;1 and the inhibitor ICK2/KRP2 modulate auxin-induced lateral root formation.

Luis Sanz, Walter Dewitte, Celine Forzani, Farah Patell, Jeroen Nieuwland, Bo Wen, Pedro Quelhas, Sarah De Jager, Craig Titmus, Aurélio Campilho and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
19.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 138 citations in OpenAlex.

  1. Article
  2. Root Meristem Maintenance Mechanisms are Key to Plant Defense Against Nanoplastics.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Ectopic Expression of PoplarFrontiers in plant science · 2022
    Article
  18. Review
  19. Auxin-Regulated Lateral Root Organogenesis.Cold Spring Harbor perspectives in biology · 2021
    Review
  20. Review

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 5 countries.

Luis SanzCardiff School of Biosciences, Cardiff University, CF103AX Cardiff, United Kingdom.
Walter Dewitte
Celine Forzani
Farah Patell
Jeroen Nieuwland
Bo Wen
Pedro Quelhas
Sarah De Jager
Craig Titmus
Aurélio Campilho
Hong Ren
Mark Estelle
Hong Wang
James A H Murray
Cardiff University · GBUniversity of California, San Diego · USUniversidade do Porto · PTUniversity of Cambridge · GBUniversity of Saskatchewan · CA

Funding

MOLECULAR GENETICS OF AUXIN ACTION IN ARABIDOPSISR01GM043644 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI ESTELLE, MARK A · 1989 to 2021
$6.0M
Biotechnology and Biological Sciences Research Council BB/E022383Biotechnology and Biological Sciences Research Council BB/E022383/1Biotechnology and Biological Sciences Research Council BB/E022383/2Biotechnology and Biological Sciences Research Council BB/E024858Biotechnology and Biological Sciences Research Council BB/E024858/1Biotechnology and Biological Sciences Research Council BB/G00482XBiotechnology and Biological Sciences Research Council BB/G00482X/1NIGMS NIH HHS GM43644NIGMS NIH HHS R01 GM043644
6 · The paper itself

Abstract

The integration of cell division in root growth and development requires mediation of developmental and physiological signals through regulation of cyclin-dependent kinase activity. Cells within the pericycle form de novo lateral root meristems, and D-type cyclins (CYCD), as regulators of the G₁-to-S phase cell cycle transition, are anticipated to play a role. Here, we show that the D-type cyclin protein CYCD2;1 is nuclear in Arabidopsis thaliana root cells, with the highest concentration in apical and lateral meristems. Loss of CYCD2;1 has a marginal effect on unstimulated lateral root density, but CYCD2;1 is rate-limiting for the response to low levels of exogenous auxin. However, while CYCD2;1 expression requires sucrose, it does not respond to auxin. The protein Inhibitor-Interactor of CDK/Kip Related Protein2 (ICK2/KRP2), which interacts with CYCD2;1, inhibits lateral root formation, and ick2/krp2 mutants show increased lateral root density. ICK2/KRP2 can modulate the nuclear levels of CYCD2;1, and since auxin reduces ICK2/KRP2 protein levels, it affects both activity and cellular distribution of CYCD2;1. Hence, as ICK2/KRP2 levels decrease, the increase in lateral root density depends on CYCD2;1, irrespective of ICK2/CYCD2;1 nuclear localization. We propose that ICK2/KRP2 restrains root ramification by maintaining CYCD2;1 inactive and that this modulates pericycle responses to auxin fluctuations.

Indexed as

ArabidopsisArabidopsis ProteinsCell CycleCell Cycle ProteinsCell NucleusCyclinsGene Expression Regulation, PlantIndoleacetic AcidsMutationPlant RootsProteasome Endopeptidase ComplexArabidopsis ProteinsATP dependent 26S proteaseCell Cycle ProteinsCycD2 protein, ArabidopsisCyclinsICK2 protein, ArabidopsisIndoleacetic AcidsProteasome Endopeptidase Complex

Identifiers

PMID21357490
PMCPMC3077792
OpenAlexW2153250075

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.