Evidence map›Paper›PMID 21353781›Full record

ReviewTrends in biochemical sciences2011

Tidying up loose ends: the role of polynucleotide kinase/phosphatase in DNA strand break repair.

Michael Weinfeld, Rajam S Mani, Ismail Abdou, R Daniel Aceytuno, J N Mark Glover

Open access · greenAbstract readReview
In one paragraph

Review in Trends in biochemical sciences, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 117 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
117citing papers in PubMed, 2 pooled it
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

117 citing papers in PubMed, 2 syntheses or guidelines pooled it, 198 citations in OpenAlex.

  1. XRCC1 Arg399Gln polymorphism is not associated with oral cancer risk: evidence from a meta-analysis.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Pooled it
  2. Pooled it
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  13. Fructose-2,6-bisphosphate restores DNA repair activity of PNKP and ameliorates neurodegenerative symptoms in Huntington's disease.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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  19. Review
  20. Base Excision DNA Repair in Plants:International journal of molecular sciences · 2023
    Review

57 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Michael WeinfeldDepartment of Oncology, University of Alberta and Cross Cancer Institute, Edmonton, Alberta, Canada. mweinfel@ualberta.ca
Rajam S Mani
Ismail Abdou
R Daniel Aceytuno
J N Mark Glover
University of Alberta · CA

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI John A. Tainer · 2001 to 2026
$89.6M
CIHRHoward Hughes Medical InstituteNCI NIH HHS P01 CA092584
6 · The paper itself

Abstract

The termini of DNA strand breaks induced by internal and external factors often require processing before missing nucleotides can be replaced by DNA polymerases and the strands rejoined by DNA ligases. Polynucleotide kinase/phosphatase (PNKP) serves a crucial role in the repair of DNA strand breaks by catalyzing the restoration of 5'-phosphate and 3'-hydroxyl termini. It participates in several DNA repair pathways through interactions with other DNA repair proteins, notably XRCC1 and XRCC4. Recent studies have highlighted the physiological importance of PNKP in maintaining the genomic stability of normal tissues, particularly developing neural cells, as well as enhancing the resistance of cancer cells to genotoxic therapeutic agents.

Indexed as

DNA BreaksDNA RepairAmino Acid SequenceAnimalsDNA-Binding ProteinsDNA Repair EnzymesHumansPhosphotransferases (Alcohol Group Acceptor)Protein BindingSequence Homology, Amino AcidX-ray Repair Cross Complementing Protein 1DNA-Binding ProteinsDNA Repair EnzymesPhosphotransferases (Alcohol Group Acceptor)PNKP protein, humanX-ray Repair Cross Complementing Protein 1XRCC1 protein, humanXRCC4 protein, human

Identifiers

PMID21353781
PMCPMC3134258
OpenAlexW2008306394

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.