Evidence map›Paper›PMID 21353298›Full record

ArticleCell2011

Double-strand breaks in heterochromatin move outside of a dynamic HP1a domain to complete recombinational repair.

Irene Chiolo, Aki Minoda, Serafin U Colmenares, Aris Polyzos, Sylvain V Costes, Gary H Karpen

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 331 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
331citing papers in PubMed, 1 pooled it
15.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

331 citing papers in PubMed, 1 synthesis or guideline pooled it, 535 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Cross-species incompatibilities offer new insights into the functional consequences of satellite DNA evolution.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2026
    Review
  4. Review
  5. The Role of Arp2/3 in End-Resection During DNA Double-Strand Break Repair.BioEssays : news and reviews in molecular, cellular and developmental biology · 2026
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. High-resolution global recombination mapping inbioRxiv : the preprint server for biology · 2026
    Article
  11. Review
  12. Article
  13. Investigating Phase Separation in Genome Folding via Multiscale Computational Modeling.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  14. Article
  15. Article
  16. Article
  17. Polymorphic 3D genome architecture mediated by transposable elements.bioRxiv : the preprint server for biology · 2026
    Article
  18. Methods to Study DNA Damage Using Drosophila melanogaster.Methods in molecular biology (Clifton, N.J.) · 2026
    Review
  19. Article
  20. Review

271 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Irene ChioloDepartment of Genome Dynamics, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Aki Minoda
Serafin U Colmenares
Aris Polyzos
Sylvain V Costes
Gary H Karpen
Lawrence Berkeley National Laboratory · USUniversity of California, Berkeley · US

Funding

Regulation of DNA Damage and Repair in HeterochromatinR01GM086613 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI KARPEN, GARY H · 2011 to 2014
$1.6M
Regulation of Gene Activity and Chromatin Structure in Drosophila HeterochromatinF32GM086111 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI COLMENARES, SERAFIN URO · 2008 to 2010
$149k
NIGMS NIH HHS 1F32GM086111NIGMS NIH HHS F32 GM086111NIGMS NIH HHS R01 GM086613
6 · The paper itself

Abstract

Double-strand breaks (DSBs) in heterochromatic repetitive DNAs pose significant threats to genome integrity, but information about how such lesions are processed and repaired is sparse. We observe dramatic expansion and dynamic protrusions of the heterochromatin domain in response to ionizing radiation (IR) in Drosophila cells. We also find that heterochromatic DSBs are repaired by homologous recombination (HR) but with striking differences from euchromatin. Proteins involved in early HR events (resection) are rapidly recruited to DSBs within heterochromatin. In contrast, Rad51, which mediates strand invasion, only associates with DSBs that relocalize outside of the domain. Heterochromatin expansion and relocalization of foci require checkpoint and resection proteins. Finally, the Smc5/6 complex is enriched in heterochromatin and is required to exclude Rad51 from the domain and prevent abnormal recombination. We propose that the spatial and temporal control of DSB repair in heterochromatin safeguards genome stability by preventing aberrant exchanges between repeats.

Indexed as

DNA RepairRecombination, GeneticAnimalsCell Cycle ProteinsChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneDNA Breaks, Double-StrandedDrosophila melanogasterDrosophila ProteinsHeterochromatinRad51 RecombinaseCell Cycle ProteinsChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneDrosophila ProteinsHeterochromatinjnj protein, DrosophilaRad51 RecombinaseSMC5 protein, Drosophila

Identifiers

PMID21353298
PMCPMC3417143
OpenAlexW2070660722

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.