Evidence map›Paper›PMID 21351181›Full record

ArticleProtein science : a publication of the Protein Society2011

Probing the self-association, intermolecular contacts, and folding propensity of amelogenin.

Moise Ndao, Kaushik Dutta, Keith M Bromley, Rajamani Lakshminarayanan, Zhi Sun, Gita Rewari, Janet Moradian-Oldak, John Spencer Evans

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 27 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Protein-mediated enamel mineralization.Frontiers in bioscience (Landmark edition) · 2012
    Review
  10. Article
  11. Amelogenin and Enamel Biomimetics.Journal of materials chemistry. B
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Moise NdaoLaboratory for Chemical Physics, New York University, New York, New York 10010, USA.
Kaushik Dutta
Keith M Bromley
Rajamani Lakshminarayanan
Zhi Sun
Gita Rewari
Janet Moradian-Oldak
John Spencer Evans
University of Southern California · USNew York University · USNew York Structural Biology Center · US

Funding

MATRIX-BASED MINERAL (MBM) ENAMEL BIOMIMETICSR01DE013414 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Janet Oldak · 2001 to 2026
$8.6M
900 MHz NMR Spectrometer for Structural BiologyP41GM066354 · NIGMS · NEW YORK STRUCTURAL BIOLOGY CENTER · PI COWBURN, DAVID · 2002 to 2006
$4.7M
INTRINSICALLY DISORDERED PROTEINS IN BIOMINERALIZATIONR01DE020099 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI OLDAK, JANET · 2009 to 2013
$2.0M
NIDCR NIH HHS DE-013414NIDCR NIH HHS DE-020099NIDCR NIH HHS R01 DE013414NIDCR NIH HHS R01 DE020099NIGMS NIH HHS P41 GM66354
6 · The paper itself

Abstract

Amelogenins are an intrinsically disordered protein family that plays a major role in the development of tooth enamel, one of the most highly mineralized materials in nature. Monomeric porcine amelogenin possesses random coil and residual secondary structures, but it is not known which sequence regions would be conformationally attractive to potential enamel matrix targets such as other amelogenins (self-assembly), other matrix proteins, cell surfaces, or biominerals. To address this further, we investigated recombinant porcine amelogenin (rP172) using "solvent engineering" techniques to simultaneously promote native-like structure and induce amelogenin oligomerization in a manner that allows identification of intermolecular contacts between amelogenin molecules. We discovered that in the presence of 2,2,2-trifluoroethanol (TFE) significant folding transitions and stabilization occurred primarily within the N- and C-termini, while the polyproline Type II central domain was largely resistant to conformational transitions. Seven Pro residues (P2, P127, P130, P139, P154, P157, P162) exhibited conformational response to TFE, and this indicates these Pro residues act as folding enhancers in rP172. The remaining Pro residues resisted TFE perturbations and thus act as conformational stabilizers. We also noted that TFE induced rP172 self-association via the formation of intermolecular contacts involving P4-H6, V19-P33, and E40-T58 regions of the N-terminus. Collectively, these results confirm that the N- and C-termini of amelogenin are conformationally responsive and represent potential interactive sites for amelogenin-target interactions during enamel matrix mineralization. Conversely, the Pro, Gln central domain is resistant to folding and this may have important functional significance for amelogenin.

Indexed as

Protein FoldingProtein Structure, SecondaryAmelogeninAmino Acid SequenceAnimalsDental EnamelMolecular Sequence DataPeptidesProtein MultimerizationRecombinant ProteinsSwineTrifluoroethanolAmelogeninPeptidespolyprolineRecombinant ProteinsTrifluoroethanol

Identifiers

PMID21351181
PMCPMC3081550
OpenAlexW1853019063

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.