Evidence map›Paper›PMID 21351069›Full record

ArticleBiotechnology and bioengineering2011

Localization of BiP to translating ribosomes increases soluble accumulation of secreted eukaryotic proteins in an Escherichia coli cell-free system.

John P Welsh, Jeanne Bonomo, James R Swartz

Abstract read
In one paragraph

Article in Biotechnology and bioengineering, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Synthesis of an Anti-CD7 Recombinant Immunotoxin Based on PE24 in CHO andInternational journal of molecular sciences · 2022
    Article
  3. Review
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

John P WelshDepartment of Chemical Engineering, Stanford University, 381 North-South Mall, Stanford, California 94305, USA.
Jeanne Bonomo
James R Swartz
Stanford University · US

Funding

Designing Proximal Chaperones for Cell-Free Protein SynthesisR21GM077508 · NIGMS · STANFORD UNIVERSITY · PI SWARTZ, JAMES R · 2006 to 2007
$423k
NIGMS NIH HHS R21 GM077508
6 · The paper itself

Abstract

The endoplasmic reticulum (ER) resident Hsp70 chaperone, BiP, docks to the Sec translocon and interacts co-translationally with polypeptides entering the ER to encourage proper folding. In order to recreate this interaction in Escherichia coli cell-free protein synthesis (CFPS) reactions, a fusion protein was formed between the ribosome-binding portion of the E. coli protein trigger factor (TF) and BiP. The biophysical affinity to ribosomes as well as the characteristic Hsp70 ATPase activity were both verified for the fusion protein. When added to E. coli-based CFPS reactions, the TF-BiP fusion chaperone increased soluble yields of several protein fragments that are normally secreted through the ER and have poor solubility in typical CFPS reactions. For comparison, a fusion between TF and the native E. coli Hsp70, DnaK, was also constructed. This fusion was also biologically active and increased soluble yields of certain protein targets in CFPS. The TF-BiP fusion described in this study can be seen as a first step in reconstituting and better understanding ER folding pathways in the prokaryotic environment of E. coli CFPS.

Indexed as

Protein BiosynthesisAdenosine TriphosphatasesAdenosine TriphosphateCell-Free SystemEndoplasmic Reticulum Chaperone BiPEscherichia coliEscherichia coli ProteinsHeat-Shock ProteinsPeptidylprolyl IsomeraseProtein BindingRecombinant Fusion ProteinsRibosomesTranslatingAdenosine TriphosphatasesAdenosine TriphosphateEndoplasmic Reticulum Chaperone BiPEscherichia coli ProteinsHeat-Shock ProteinsPeptidylprolyl IsomeraseRecombinant Fusion Proteinstrigger factor, E coli

Identifiers

PMID21351069
PMCPMC3120890
OpenAlexW2171907004

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.