Evidence map›Paper›PMID 21349709›Full record

ArticleBioorganic & medicinal chemistry letters2011

Exploring new near-infrared fluorescent disulfide-based cyclic RGD peptide analogs for potential integrin-targeted optical imaging.

Yunpeng Ye, Baogang Xu, Gregory V Nikiforovich, Sharon Bloch, Samuel Achilefu

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry letters, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Tumor-penetrating iRGD peptide inhibits metastasis.Molecular cancer therapeutics · 2015
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yunpeng YeDepartment of Radiology, Washington University School of Medicine, 4525 Scott Avenue, St Louis, MO 63110, USA.
Baogang Xu
Gregory V Nikiforovich
Sharon Bloch
Samuel Achilefu

Funding

Optical Probes &Methods for Imaging Integrin ExpressionR01CA109754 · NCI · WASHINGTON UNIVERSITY · PI ACHILEFU, SAMUEL · 2004 to 2008
$2.9M
MOLECULAR PROBES AND METHODS FOR FLUORESCENCE LIFETIME TOMOGRAPHY AND MICROSCOPYR01EB008111 · NIBIB · WASHINGTON UNIVERSITY · PI ACHILEFU, SAMUEL · 2009 to 2012
$1.9M
NEAR INFRARED PH-SENSITIVE MOLECULAR PROBES FOR MICROSCOPY OF CELLS AND TISSUESR01EB007276 · NIBIB · WASHINGTON UNIVERSITY · PI ACHILEFU, SAMUEL · 2008 to 2011
$1.3M
Multiphoton microscopy using near infrared DyesR33CA123537 · NCI · WASHINGTON UNIVERSITY · PI ACHILEFU, SAMUEL · 2008 to 2010
$1.3M
ADVANCES IN OPTICS FOR BIOTECHNOLOGY, MEDICINE AND SURGERY CONFERENCER13EB007477 · NIBIB · WASHINGTON UNIVERSITY · PI ACHILEFU, SAMUEL · 2007 to 2007
$17k
NCI NIH HHS R01 CA109754NCI NIH HHS R01CA109754NCI NIH HHS R33 CA123537NIBIB NIH HHS R01 EB007276NIBIB NIH HHS R01EB00811NIBIB NIH HHS R01 EB008111NIBIB NIH HHS R13 EB007477
6 · The paper itself

Abstract

We synthesized disulfide-based cyclic RGD pentapeptides bearing a near-infrared fluorescent dye (cypate), represented by cypate-c(CRGDC) (1) for integrin-targeted optical imaging. These compounds were compared with the traditional lactam-based cyclic RGD counterpart, cypate-c(RGDfK) (2). Molecular modeling suggests that the binding affinity of 2 to integrin α(v)β(3) is an order of magnitude higher than that of 1. This was confirmed experimentally, which further showed that substitution of Gly with Pro, Val and Tyr in 1 remarkably hampered the α(v)β(3) binding. Interestingly, cell microscopy with A549 cells showed that 1 exhibited higher cellular staining than 2. These results indicate that factors other than receptor binding affinity to α(v)β(3) dimeric proteins mediate cellular uptake. Consequently, 1 and its analogs may serve as valuable molecular probes for investigating the selectivity and specificity of integrin targeting by optical imaging.

Indexed as

Chromatography, High Pressure LiquidCyclizationDisulfidesFluorescent DyesIntegrinsOligopeptidesSpectrometry, Mass, Electrospray IonizationSpectroscopy, Near-Infraredarginyl-glycyl-aspartic acidDisulfidesFluorescent DyesIntegrinsOligopeptides

Identifiers

PMID21349709
PMCPMC3056947

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.