Evidence map›Paper›PMID 21347441›Full record

ArticlePloS one2011

Role of cell-to-cell variability in activating a positive feedback antiviral response in human dendritic cells.

Jianzhong Hu, German Nudelman, Yishai Shimoni, Madhu Kumar, Yaomei Ding, Carolina López, Fernand Hayot, James G Wetmur, Stuart C Sealfon

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
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  4. Review
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  6. Article
  7. Article
  8. Kinetic Modeling of Virus Growth in Cells.Microbiology and molecular biology reviews : MMBR · 2018
    Review
  9. Article
  10. Single-cell analysis of early antiviral gene expression reveals a determinant of stochastic IFNB1 expression.Integrative biology : quantitative biosciences from nano to macro · 2017
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Jianzhong HuDepartment of Microbiology, Mount Sinai School of Medicine, New York, New York, United States of America.
German Nudelman
Yishai Shimoni
Madhu Kumar
Yaomei Ding
Carolina López
Fernand Hayot
James G Wetmur
Stuart C Sealfon
Icahn School of Medicine at Mount Sinai · US

Funding

NIAID NIH HHS U19 AI06231PHS HHS HHSN266200500021C
6 · The paper itself

Abstract

In the first few hours following Newcastle disease viral infection of human monocyte-derived dendritic cells, the induction of IFNB1 is extremely low and the secreted type I interferon response is below the limits of ELISA assay. However, many interferon-induced genes are activated at this time, for example DDX58 (RIGI), which in response to viral RNA induces IFNB1. We investigated whether the early induction of IFNBI in only a small percentage of infected cells leads to low level IFN secretion that then induces IFN-responsive genes in all cells. We developed an agent-based mathematical model to explore the IFNBI and DDX58 temporal dynamics. Simulations showed that a small number of early responder cells provide a mechanism for efficient and controlled activation of the DDX58-IFNBI positive feedback loop. The model predicted distributions of single cell responses that were confirmed by single cell mRNA measurements. The results suggest that large cell-to-cell variation plays an important role in the early innate immune response, and that the variability is essential for the efficient activation of the IFNB1 based feedback loop.

Indexed as

Feedback, PhysiologicalModels, ImmunologicalDEAD Box Protein 58DEAD-box RNA HelicasesDendritic CellsGene Expression RegulationHumansImmunity, InnateInterferon-betaMonocytesNewcastle disease virusReceptors, ImmunologicRNA, MessengerStochastic ProcessesDEAD Box Protein 58DEAD-box RNA HelicasesInterferon-betaReceptors, ImmunologicRIGI protein, humanRNA, Messenger

Identifiers

PMID21347441
PMCPMC3035661
OpenAlexW2072743939

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.