ArticlePloS one2011
Comparative functional genomics of salt stress in related model and cultivated plants identifies and overcomes limitations to translational genomics.
Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.
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Who cites it
37 citing papers in PubMed.
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- Drought Stress Responses in Arabica Coffee Genotypes: Physiological and Metabolic Insights.Plants (Basel, Switzerland) · 2024Article
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- Cross-stress gene expression atlas of Marchantia polymorpha reveals the hierarchy and regulatory principles of abiotic stress responses.Nature communications · 2023Article
- Transcriptomic Analysis Provides Insight into the ROS Scavenging System and Regulatory Mechanisms inInternational journal of molecular sciences · 2022Article
- Antioxidative and osmoprotecting mechanisms in carrot plants tolerant to soil salinity.Scientific reports · 2022Article
- Kiwifruit Metabolomics-An Investigation of within Orchard Metabolite Variability of Two Cultivars ofMetabolites · 2021Article
- Antioxidative and Metabolic Contribution to Salinity Stress Responses in Two Rapeseed Cultivars during the Early Seedling Stage.Antioxidants (Basel, Switzerland) · 2021Article
- A comparative metabolomics analysis of the halophyte Suaeda salsa and Salicornia europaea.Environmental geochemistry and health · 2021Article
- Identification of Alternative Mitochondrial Electron Transport Pathway Components in Chickpea Indicates a Differential Response to Salinity Stress between Cultivars.International journal of molecular sciences · 2020Article
- Aquaponic and Hydroponic Solutions Modulate NaCl-Induced Stress in Drug-TypeFrontiers in plant science · 2020Article
- Article
- Transcriptomic Profiling Identifies Candidate Genes Involved in the Salt Tolerance of the XerophyteGenes · 2019Article
- Analysis of widely targeted metabolites of the euhalophyte Suaeda salsa under saline conditions provides new insights into salt tolerance and nutritional value in halophytic species.BMC plant biology · 2019Article
- Genome-wide association analysis of salinity responsive traits in Medicago truncatula.Plant, cell & environment · 2019Article
- Transcriptome analysis reveals regulatory framework for salt and osmotic tolerance in a succulent xerophyte.BMC plant biology · 2019Article
- Article
- Polyamines and Legumes: Joint Stories of Stress, Nitrogen Fixation and Environment.Frontiers in plant science · 2019Review
- DistinctFrontiers in plant science · 2018Article
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9 authors.
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Abstract
One of the objectives of plant translational genomics is to use knowledge and genes discovered in model species to improve crops. However, the value of translational genomics to plant breeding, especially for complex traits like abiotic stress tolerance, remains uncertain. Using comparative genomics (ionomics, transcriptomics and metabolomics) we analyzed the responses to salinity of three model and three cultivated species of the legume genus Lotus. At physiological and ionomic levels, models responded to salinity in a similar way to crop species, and changes in the concentration of shoot Cl(-) correlated well with tolerance. Metabolic changes were partially conserved, but divergence was observed amongst the genotypes. Transcriptome analysis showed that about 60% of expressed genes were responsive to salt treatment in one or more species, but less than 1% was responsive in all. Therefore, genotype-specific transcriptional and metabolic changes overshadowed conserved responses to salinity and represent an impediment to simple translational genomics. However, 'triangulation' from multiple genotypes enabled the identification of conserved and tolerant-specific responses that may provide durable tolerance across species.
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