Evidence map›Paper›PMID 21343300›Full record

ArticleThe Journal of biological chemistry2011

Biotinylation, a post-translational modification controlled by the rate of protein-protein association.

Maria Ingaramo, Dorothy Beckett

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Maria IngaramoDepartment of Chemistry and Biochemistry, Center for Biomolecular Structure and Organization, University of Maryland, College Park, Maryland 20742, USA.
Dorothy Beckett
University of Maryland, College Park · US

Funding

QUANTITATIVE STUDIES OF THE BIOTIN REGULATORY SYSTEMR01GM046511 · NIGMS · UNIV OF MARYLAND, COLLEGE PARK · PI BECKETT, DOROTHY · 1997 to 2010
$2.7M
Purchase of a Beckman XL-1 Analytical UltracentrifugeS10RR015899 · NCRR · UNIVERSITY OF MARYLAND COLLEGE PK CAMPUS · PI BECKETT, DOROTHY · 2002 to 2002
$215k
NCRR NIH HHS S10-RR15899NIGMS NIH HHS R01 GM046511NIGMS NIH HHS R01-GM46511
6 · The paper itself

Abstract

Biotin protein ligases catalyze specific covalent linkage of the coenzyme biotin to biotin-dependent carboxylases. The reaction proceeds in two steps, including synthesis of an adenylated intermediate followed by biotin transfer to the carboxylase substrate. In this work specificity in the transfer reaction was investigated using single turnover stopped-flow and quench-flow assays. Cognate and noncognate reactions were measured using the enzymes and minimal biotin acceptor substrates from Escherichia coli, Pyrococcus horikoshii, and Homo sapiens. The kinetic analysis demonstrates that for all enzyme-substrate pairs the bimolecular rate of association of enzyme with substrate limits post-translational biotinylation. In addition, in noncognate reactions the three enzymes displayed a range of selectivities. These results highlight the importance of protein-protein binding kinetics for specific biotin addition to carboxylases and provide one mechanism for determining biotin distribution in metabolism.

Indexed as

Archaeal ProteinsBiotinylationEscherichia coliEscherichia coli ProteinsHumansKineticsProtein BindingProtein Processing, Post-TranslationalPyrococcus horikoshiiArchaeal ProteinsEscherichia coli Proteins

Identifiers

PMID21343300
PMCPMC3075653
OpenAlexW1992281055

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.