Evidence map›Paper›PMID 21341745›Full record

ArticleJournal of medicinal chemistry2011

A novel approach for predicting P-glycoprotein (ABCB1) inhibition using molecular interaction fields.

Fabio Broccatelli, Emanuele Carosati, Annalisa Neri, Maria Frosini, Laura Goracci, Tudor I Oprea, Gabriele Cruciani

Open access · greenAbstract read
In one paragraph

Article in Journal of medicinal chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 175 citations in OpenAlex.

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  13. Real-World Molecular Out-Of-Distribution: Specification and Investigation.Journal of chemical information and modeling · 2024
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5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Fabio BroccatelliLaboratory of Chemometrics, Department of Chemistry, University of Perugia, Via Elce di Sotto 10, I-06123 Perugia, Italy.
Emanuele Carosati
Annalisa Neri
Maria Frosini
Laura Goracci
Tudor I Oprea
Gabriele Cruciani
University of Perugia · ITUniversity of Siena · ITBiocom · USMolecular Discovery (United Kingdom) · GB

Funding

Yeast Biology ConsortiumU54MH084690 · NIMH · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI TEGOS, GEORGE P · 2008 to 2013
$14.4M
NIMH NIH HHS 5U54MH084690-03NIMH NIH HHS U54 MH084690
6 · The paper itself

Abstract

P-glycoprotein (Pgp or ABCB1) is an ABC transporter protein involved in intestinal absorption, drug metabolism, and brain penetration, and its inhibition can seriously alter a drug's bioavailability and safety. In addition, inhibitors of Pgp can be used to overcome multidrug resistance. Given this dual purpose, reliable in silico procedures to predict Pgp inhibition are of great interest. A large and accurate literature collection yielded more than 1200 structures; a model was then constructed using various molecular interaction field-based technologies, considering pharmacophoric features and those physicochemical properties related to membrane partitioning. High accuracy was demonstrated internally with two different validation sets and, moreover, using a number of molecules, for which Pgp inhibition was not experimentally available but was evaluated in-house. All of the validations confirmed the robustness of the model and its suitability to help medicinal chemists in drug discovery. The information derived from the model was rationalized as a pharmacophore for competitive Pgp inhibition.

Indexed as

LigandsModels, MolecularQuantitative Structure-Activity RelationshipAnimalsAripiprazoleATP Binding Cassette Transporter, Subfamily B, Member 1ButyrophenonesCell Line, TumorCell Membrane PermeabilityDrug DesignHumansHydrophobic and Hydrophilic InteractionsMiceMolecular StructurePiperazinesPiperidinesAripiprazoleATP Binding Cassette Transporter, Subfamily B, Member 1ButyrophenonesebastineLigandsPiperazinesPiperidinesQuinolones

Identifiers

PMID21341745
PMCPMC3069647
OpenAlexW2040651998

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.