ReviewNeuroinformatics2011
Neuronal tracing for connectomic studies.
Review in Neuroinformatics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
25 citing papers in PubMed, 47 citations in OpenAlex.
- A neuronal imaging dataset for deep learning in the reconstruction of single-neuron axons.Frontiers in neuroinformatics · 2025Article
- From pixels to connections: exploring in vitro neuron reconstruction software for network graph generation.Communications biology · 2024Review
- DDeep3M+: adaptive enhancement powered weakly supervised learning for neuron segmentation.Neurophotonics · 2023Article
- Nerve Targeting via Myelin Protein Zero and the Impact of Dimerization on Binding Affinity.Molecules (Basel, Switzerland) · 2022Article
- Efficient metadata mining of web-accessible neural morphologies.Progress in biophysics and molecular biology · 2022Article
- Prediction of Neural Diameter From Morphology to Enable Accurate Simulation.Frontiers in neuroinformatics · 2021Article
- Brain-Wide Shape Reconstruction of a Traced Neuron Using the Convex Image Segmentation Method.Neuroinformatics · 2020Article
- Optimization of Traced Neuron Skeleton Using Lasso-Based Model.Frontiers in neuroanatomy · 2019Article
- The Known and Missing Links Between the Cerebellum, Basal Ganglia, and Cerebral Cortex.Cerebellum (London, England) · 2017Article
- SparseTracer: the Reconstruction of Discontinuous Neuronal Morphology in Noisy Images.Neuroinformatics · 2017Article
- Clustered structural and functional plasticity of dendritic spines.Brain research bulletin · 2017Review
- The missing link: Predicting connectomes from noisy and partially observed tract tracing data.PLoS computational biology · 2017Article
- Brain-Wide Mapping of Axonal Connections: Workflow for Automated Detection and Spatial Analysis of Labeling in Microscopic Sections.Frontiers in neuroinformatics · 2016Article
- Extensive Direct Subcortical Cerebellum-Basal Ganglia Connections in Human Brain as Revealed by Constrained Spherical Deconvolution Tractography.Frontiers in neuroanatomy · 2016Article
- Learning-guided automatic three dimensional synapse quantification for drosophila neurons.BMC bioinformatics · 2015Article
- Digital reconstruction of the cell body in dense neural circuits using a spherical-coordinated variational model.Scientific reports · 2014Article
- BIOCAT: a pattern recognition platform for customizable biological image classification and annotation.BMC bioinformatics · 2013Article
- The mind-brain relationship as a mathematical problem.ISRN neuroscience · 2013Review
- NeuroGPS: automated localization of neurons for brain circuits using L1 minimization model.Scientific reports · 2013Article
- Serial section registration of axonal confocal microscopy datasets for long-range neural circuit reconstruction.Journal of neuroscience methods · 2012Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
1 author at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Reconstruction of the complete wiring diagram, or connectome, of a neural circuit provides an alternative approach to conventional circuit analysis. One major obstacle of connectomics lies in segmenting and tracing neuronal processes from the vast number of images obtained with optical or electron microscopy. Here I review recent progress in automated tracing algorithms for connectomic reconstruction with fluorescence and electron microscopy, and discuss the challenges to image analysis posed by novel optical imaging techniques.
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What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.