Evidence map›Paper›PMID 21339808›Full record

ArticlePloS one2011

Interleukin 12B (IL12B) genetic variation and pulmonary tuberculosis: a study of cohorts from The Gambia, Guinea-Bissau, United States and Argentina.

Gerard A J Morris, Digna R Velez Edwards, Philip C Hill, Christian Wejse, Cyrille Bisseye, Rikke Olesen, Todd L Edwards, John R Gilbert, Jamie L Myers, Martin E Stryjewski and 13 more

Erratum issuedOpen access · goldAbstract readComparative Study
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 45 citations in OpenAlex.

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4 · The record

Corrections and comments

  • Erratum issued
  • Erratum issued
  • Erratum issued
  • Erratum issued
5 · Who and what money

Authors and funding

23 authors at 12 institutions in 7 countries.

Gerard A J MorrisMRC Laboratories, Fajara, The Gambia (West Africa).
Digna R Velez Edwards
Philip C Hill
Christian Wejse
Cyrille Bisseye
Rikke Olesen
Todd L Edwards
John R Gilbert
Jamie L Myers
Martin E Stryjewski
Eduardo Abbate
Rosa Estevan
Carol D Hamilton
Alessandra Tacconelli
Giuseppe Novelli
Ercole Brunetti
Peter Aaby
Morten Sodemann
Lars Østergaard
Richard Adegbola
Scott M Williams
William K Scott
Giorgio Sirugo
MRC Unit the Gambia · GMOspedale San Pietro Fatebenefratelli · ITUniversity of Miami · USAarhus University Hospital · DKBandim Health Project · GWDr. John T. Macdonald Foundation · USHospital Muñiz · ARCentro de Educación Médica e Investigaciones Clínicas Norberto Quirno · ARDuke Medical Center · USUniversity of Rome Tor Vergata · ITUniversity of Southern Denmark · DKVanderbilt University · US

Funding

Genetic Studies of Human Susceptibility to TuberculosisR01HL068534 · NHLBI · DUKE UNIVERSITY · PI SCOTT, WILLIAM K. · 2001 to 2005
$2.3M
Medical Research Council MC_U190071468Medical Research Council MC_UP_A900_1122NHLBI NIH HHS HL068534NHLBI NIH HHS R01 HL068534
6 · The paper itself

Abstract

We examined whether polymorphisms in interleukin-12B (IL12B) associate with susceptibility to pulmonary tuberculosis (PTB) in two West African populations (from The Gambia and Guinea-Bissau) and in two independent populations from North and South America. Nine polymorphisms (seven SNPs, one insertion/deletion, one microsatellite) were analyzed in 321 PTB cases and 346 controls from Guinea-Bissau and 280 PTB cases and 286 controls from The Gambia. For replication we studied 281 case and 179 control African-American samples and 221 cases and 144 controls of European ancestry from the US and Argentina. First-stage single locus analyses revealed signals of association at IL12B 3' UTR SNP rs3212227 (unadjusted allelic p = 0.04; additive genotypic p = 0.05, OR = 0.78, 95% CI [0.61-0.99]) in Guinea-Bissau and rs11574790 (unadjusted allelic p = 0.05; additive genotypic p = 0.05, OR = 0.76, 95% CI [0.58-1.00]) in The Gambia. Association of rs3212227 was then replicated in African-Americans (rs3212227 allelic p = 0.002; additive genotypic p = 0.05, OR = 0.78, 95% CI [0.61-1.00]); most importantly, in the African-American cohort, multiple significant signals of association (seven of the nine polymorphisms tested) were detected throughout the gene. These data suggest that genetic variation in IL12B, a highly relevant candidate gene, is a risk factor for PTB in populations of African ancestry, although further studies will be required to confirm this association and identify the precise mechanism underlying it.

Indexed as

Genetic VariationAdolescentAdultAgedAged, 80 and overArgentinaBlack or African AmericanBlack PeopleCase-Control StudiesCohort StudiesFemaleGambiaGene FrequencyGenetic Association StudiesGenetics, PopulationGuinea-BissauIL12B protein, humanInterleukin-12 Subunit p40

Identifiers

PMID21339808
PMCPMC3037276
OpenAlexW2035234581

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.