Evidence map›Paper›PMID 21335511›Full record

ArticleCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology2011

A sex-specific association between a 15q25 variant and upper aerodigestive tract cancers.

Dan Chen, Therese Truong, Valerie Gaborieau, Graham Byrnes, Amelie Chabrier, Shu-chun Chuang, Andrew F Olshan, Mark C Weissler, Jingchun Luo, Marjorie Romkes and 58 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Oral premalignancy: the roles of early detection and chemoprevention.Otolaryngologic clinics of North America · 2013
    Review
  7. Article
  8. From men to mice: CHRNA5/CHRNA3, smoking behavior and disease.Nicotine & tobacco research : official journal of the Society for Research on Nicotine and Tobacco · 2012
    Review
  9. Article
  10. A case-control study of a sex-specific association between a 15q25 variant and lung cancer risk.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2011
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

68 authors at 1 institution in 3 countries.

Dan ChenInternational Agency for Research on Cancer (IARC), 150 Cours Albert Thomas, 69372 Lyon CEDEX 08, France.
Therese Truong
Valerie Gaborieau
Graham Byrnes
Amelie Chabrier
Shu-chun Chuang
Andrew F Olshan
Mark C Weissler
Jingchun Luo
Marjorie Romkes
Shama Buch
Tomoko Nukui
Silvia Franceschi
Rolando Herrero
Renato Talamini
Karl T Kelsey
Brock Christensen
Michael D McClean
Martin Lacko
Johannes J Manni
Wilbert H M Peters
Jan Lubiński
Joanna Trubicka
Marcin Lener
Joshua E Muscat
Philip Lazarus
Qingyi Wei
Erich M Sturgis
Zuo-Feng Zhang
Shen-Chih Chang
Renyi Wang
Stephen M Schwartz
Chu Chen
Simone Benhamou
Pagona Lagiou
Ivana Holcátová
Lorenzo Richiardi
Kristina Kjaerheim
Antonio Agudo
Xavier Castellsagué
Tatiana V Macfarlane
Luigi Barzan
Cristina Canova
Nalin S Thakker
David I Conway
Ariana Znaor
Claire M Healy
Wolfgang Ahrens
David Zaridze
Neonila Szeszenia-Dabrowska
Jolanta Lissowska
Eleonora Fabianova
Alexandru Bucur
Vladimir Bencko
Lenka Foretova
Vladimir Janout
Maria Paula Curado
Sergio Koifman
Ana Menezes
Victor Wünsch-Filho
José Eluf-Neto
Leticia Fernandez
Stefania Boccia
Mia Hashibe
Richard B Hayes
Paolo Boffetta
Paul Brennan
James D McKay
University of North Carolina at Chapel Hill · US

Funding

WILD TYPE P53-BASED ADJUVANT IMMUNOTHERAPY FOR SCCHNP50CA097190 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Heath Devin Skinner, Jose P. Zevallos · 2004 to 2026
$49.6M
Carolina Population CenterR24HD050924 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MORGAN, SAMUEL PHILIP · 2005 to 2014
$10.0M
UCLA CANCER EPIDEMIOLOGY TRAINING PROGRAMT32CA009142 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ZHANG, ZUO-FENG · 1986 to 2024
$6.3M
Molecular Epidemiology of Head and Neck CancerR01ES011740 · NIEHS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI WEI, QINGYI · 2001 to 2012
$6.3M
GENETICS OF TOBACCO AND ALCOHOL RELATED CANCERSR01CA092039 · NCI · INTERNATIONAL AGENCY FOR RES ON CANCER · PI BRENNAN, PAUL JOSEPH · 2003 to 2010
$3.6M
Patterns of Somatic Gene Alterations in Oral CancerR01CA100679 · NCI · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI KELSEY, KARL TIMOTHY · 2004 to 2012
$2.6M
Investigation of genetic variation in the alcohol metabolism genes and other keyR03DE020116 · NIDCR · INTERNATIONAL AGENCY FOR RES ON CANCER · PI MCKAY, JAMES DOWLING · 2010 to 2011
$175k
Medical Research Council G0801056NCI NIH HHS P50 CA097190NCI NIH HHS R01 CA092039NCI NIH HHS R01 CA092039 05/05S1NCI NIH HHS R01 CA100679NCI NIH HHS T32 CA009142NICHD NIH HHS R24 HD050924NIDCR NIH HHS 1R03DE020116-01NIDCR NIH HHS R03 DE020116NIEHS NIH HHS R01 ES011740
6 · The paper itself

Abstract

backgroundSequence variants located at 15q25 have been associated with lung cancer and propensity to smoke. We recently reported an association between rs16969968 and risk of upper aerodigestive tract (UADT) cancers (oral cavity, oropharynx, hypopharynx, larynx, and esophagus) in women (OR = 1.24, P = 0.003) with little effect in men (OR = 1.04, P = 0.35).

methodsIn a coordinated genotyping study within the International Head and Neck Cancer Epidemiology (INHANCE) consortium, we have sought to replicate these findings in an additional 4,604 cases and 6,239 controls from 10 independent UADT cancer case-control studies.

resultsrs16969968 was again associated with UADT cancers in women (OR = 1.21, 95% CI = 1.08-1.36, P = 0.001) and a similar lack of observed effect in men [OR = 1.02, 95% CI = 0.95-1.09, P = 0.66; P-heterogeneity (P(het)) = 0.01]. In a pooled analysis of the original and current studies, totaling 8,572 UADT cancer cases and 11,558 controls, the association was observed among females (OR = 1.22, 95% CI = 1.12-1.34, P = 7 × 10(-6)) but not males (OR = 1.02, 95% CI = 0.97-1.08, P = 0.35; P(het) = 6 × 10(-4)). There was little evidence for a sex difference in the association between this variant and cigarettes smoked per day, with male and female rs16969968 variant carriers smoking approximately the same amount more in the 11,991 ever smokers in the pooled analysis of the 14 studies (P(het) = 0.86).

conclusionsThis study has confirmed a sex difference in the association between the 15q25 variant rs16969968 and UADT cancers. IMPACT: Further research is warranted to elucidate the mechanisms underlying these observations.

Indexed as

Chromosomes, Human, Pair 15AgedAged, 80 and overAmericasCase-Control StudiesEuropeFemaleGenotypeHead and Neck NeoplasmsHumansMaleMiddle AgedSex FactorsSmoking

Identifiers

PMID21335511
PMCPMC3070066
OpenAlexW2168689036

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.