Evidence map›Paper›PMID 21330472›Full record

ArticleBlood2011

cpsf1 is required for definitive HSC survival in zebrafish.

Niccolò Bolli, Elspeth M Payne, Jennifer Rhodes, Evisa Gjini, Adam B Johnston, Feng Guo, Jeong-Soo Lee, Rodney A Stewart, John P Kanki, Aye T Chen and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Article
  3. Zebrafish models of acute leukemias: Current models and future directions.Wiley interdisciplinary reviews. Developmental biology · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 2 countries.

Niccolò BolliDepartment of Pediatric Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA, USA. niccolo_bolli@dfci.harvard.edu
Elspeth M Payne
Jennifer Rhodes
Evisa Gjini
Adam B Johnston
Feng Guo
Jeong-Soo Lee
Rodney A Stewart
John P Kanki
Aye T Chen
Yi Zhou
Leonard I Zon
A Thomas Look
Harvard University · USDana-Farber Cancer Institute · USHoward Hughes Medical Institute · USFox Chase Cancer Center · USHuntsman Cancer Institute · USQueen Mary University of London · GB

Funding

Genetic Basis of Myeloid Neoplasia--Mutagenesis ScreensR01CA093152 · NCI · DANA-FARBER CANCER INSTITUTE · PI LOOK, A THOMAS · 2001 to 2005
$2.1M
K99 to R00 Transition-Neural Crest Migration and Survival in ZebrafishR00NS058608 · NINDS · UNIVERSITY OF UTAH · PI STEWART, RODNEY A. · 2009 to 2011
$747k
NCI NIH HHS R01 CA093152NCI NIH HHS R01 CA93152NINDS NIH HHS R00 NS058608
6 · The paper itself

Abstract

A comprehensive understanding of the genes and pathways regulating hematopoiesis is needed to identify genes causally related to bone marrow failure syndromes, myelodysplastic syndromes, and hematopoietic neoplasms. To identify novel genes involved in hematopoiesis, we performed an ethyl-nitrosourea mutagenesis screen in zebrafish (Danio rerio) to search for mutants with defective definitive hematopoiesis. We report the recovery and analysis of the grechetto mutant, which harbors an inactivating mutation in cleavage and polyadenylation specificity factor 1 (cpsf1), a gene ubiquitously expressed and required for 3' untranslated region processing of a subset of pre-mRNAs. grechetto mutants undergo normal primitive hematopoiesis and specify appropriate numbers of definitive HSCs at 36 hours postfertilization. However, when HSCs migrate to the caudal hematopoietic tissue at 3 days postfertilization, their numbers start decreasing as a result of apoptotic cell death. Consistent with Cpsf1 function, c-myb:EGFP(+) cells in grechetto mutants also show defective polyadenylation of snrnp70, a gene required for HSC development. By 5 days postfertilization, definitive hematopoiesis is compromised and severely decreased blood cell numbers are observed across the myeloid, erythroid, and lymphoid cell lineages. These studies show that cpsf1 is essential for HSC survival and differentiation in caudal hematopoietic tissue.

Indexed as

AnimalsCell DifferentiationCell SurvivalCleavage And Polyadenylation Specificity FactorGene Expression Regulation, DevelopmentalHematopoiesisHematopoietic Stem CellsMaleMutagenesisPhenotypeZebrafishCleavage And Polyadenylation Specificity Factor

Identifiers

PMID21330472
PMCPMC3087528
OpenAlexW2007511773

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.