Evidence map›Paper›PMID 21329791›Full record

ArticleMethods in enzymology2011

CFTR expression regulation by the unfolded protein response.

Rafal Bartoszewski, Andras Rab, Lianwu Fu, Sylwia Bartoszewska, James Collawn, Zsuzsa Bebok

Open access · greenAbstract read
In one paragraph

Article in Methods in enzymology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
19.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 49 citations in OpenAlex.

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  14. FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
  15. Primary endothelial cell-specific regulation of hypoxia-inducible factor (HIF)-1 and HIF-2 and their target gene expression profiles during hypoxia.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
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  19. Ion channels of the lung and their role in disease pathogenesis.American journal of physiology. Lung cellular and molecular physiology · 2017
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Rafal BartoszewskiDepartment of Cell Biology, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Andras Rab
Lianwu Fu
Sylwia Bartoszewska
James Collawn
Zsuzsa Bebok
University of Alabama at Birmingham · US

Funding

Cell Biology of CFTR in Polarized EpitheliaR01DK060065 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI COLLAWN, JAMES F. · 2003 to 2013
$3.1M
CFTR Biogenesis and Function in EpitheliaR01HL076587 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI BEBOK, ZSUZSA · 2004 to 2012
$2.6M
NHLBI NIH HHS HL076587NHLBI NIH HHS R01 HL076587NIDDK NIH HHS DK060065NIDDK NIH HHS R01 DK060065
6 · The paper itself

Abstract

The cystic fibrosis transmembrane conductance regulator (CFTR) is a chloride channel and key regulator of epithelial functions. Mutations in the CFTR gene lead to reduced or dysfunctional CFTR protein and cause cystic fibrosis (CF), a generalized exocrinopathy affecting multiple organs. In the airways, loss of CFTR function leads to thickened mucus, reduced mucociliary clearance, chronic infections, and respiratory failure. Common airway disorders such as bronchitis and chronic obstructive pulmonary disease (COPD) also present CF-like symptoms such as mucus congestion and chronic inflammation without mutations in CFTR. The primary risk factors for COPD and chronic bronchitis include environmental stress insults such as pollutants and infections that often result in hypoxic conditions. Furthermore, environmental factors such as cigarette smoke and reactive oxygen species have been implicated in reduced CFTR function. Activation of cellular stress responses by these factors promotes differential, stress-associated gene expression regulation. During our investigations on the mechanisms of CFTR expression regulation, we have shown that the ER stress response, the unfolded protein response (UPR), decreases CFTR expression at the transcriptional, translational, and maturational levels. Here, we provide a detailed description of the methods we employ to study CFTR expression regulation by the UPR. Similar approaches are applicable in studies on other genes and how they are affected by the UPR.

Indexed as

Genetic TechniquesUnfolded Protein ResponseAnimalsBlotting, WesternCell LineChromatin ImmunoprecipitationCystic FibrosisCystic Fibrosis Transmembrane Conductance RegulatorEndoplasmic ReticulumEpithelial CellsHumansReverse Transcriptase Polymerase Chain ReactionRNA, MessengerTranscription, GeneticCystic Fibrosis Transmembrane Conductance RegulatorRNA, Messenger

Identifiers

PMID21329791
PMCPMC4415166
OpenAlexW1559486600

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.