Evidence map›Paper›PMID 21329766›Full record

ArticleGene expression patterns : GEP

Ontological aspects of pluripotency and stemness gene expression pattern in the rhesus monkey.

Namdori R Mtango, Catherine A VandeVoort, Keith E Latham

Abstract read
In one paragraph

Article in Gene expression patterns : GEP. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Namdori R MtangoThe Fels Institute for Cancer Research & Molecular Biology, Philadelphia, PA 19140, USA.
Catherine A VandeVoort
Keith E Latham

Funding

ZONA PELLUCIDA PEPTIDES AS IMMUNOCONTRACEPTIVE ANTIGENSP51RR000169 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI HYDE, DALLAS MELVIN · 1985 to 2011
$126.2M
The Primate Embryo Gene Expression ResourceR24RR015253 · NCRR · TEMPLE UNIV OF THE COMMONWEALTH · PI LATHAM, KEITH E · 2000 to 2011
$4.9M
PROTOCOLS FOR MATURING AND FREEZING OOCYTESR01RR013439 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI VANDEVOORT, CATHERINE A · 1998 to 2006
$3.5M
Primate Embryo Gene Expression ResourceR24OD012221 · OD · TEMPLE UNIV OF THE COMMONWEALTH · PI LATHAM, KEITH E · 2012 to 2016
$3.0M
NCRR NIH HHS P51 RR000169NCRR NIH HHS R01 RR013439NCRR NIH HHS R01RR13439NCRR NIH HHS R24 RR015253NCRR NIH HHS RR00169NCRR NIH HHS RR-15253NIH HHS R24 OD012221
6 · The paper itself

Abstract

Two essential aspects of mammalian development are the progressive specialization of cells toward different lineages, and the maintenance of progenitor cells that will give rise to the differentiated components of each tissue and also contribute new cells as older cells die or become injured. The transition from totipotentiality to pluripotentiality, to multipotentiality, to monopotentiality, and then to differentiation is a continuous process during development. The ontological relationship between these different stages is not well understood. We report for the first time an ontological survey of expression of 45 putative "stemness" and "pluripotency" genes in rhesus monkey oocytes and preimplantation stage embryos, and comparison to the expression in the inner cell mass, trophoblast stem cells, and a rhesus monkey (ORMES6) embryonic stem cell line. Our results reveal that some of these genes are not highly expressed in all totipotent or pluripotent cell types. Some are predominantly maternal mRNAs present in oocytes and embryos before transcriptional activation, and diminishing before the blastocyst stage. Others are well expressed in morulae or early blastocysts, but are poorly expressed in later blastocysts or ICMs. Also, some of the genes employed to induce pluripotent stem cells from somatic cells (iPS genes) appear unlikely to play major roles as stemness or pluripotency genes in normal embryos.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsAntigens, DifferentiationBlastocyst Inner Cell MassCells, CulturedEctodermEmbryonic Stem CellsEndodermFemaleGene Expression ProfilingMacaca mulattaMesodermOocytesPluripotent Stem CellsRNA, MessengerTotipotent Stem CellsAntigens, DifferentiationRNA, Messenger

Identifiers

PMID21329766
PMCPMC3109727

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.