Evidence map›Paper›PMID 21327447›Full record

ArticleFunctional & integrative genomics2011

TaNF-YB3 is involved in the regulation of photosynthesis genes in Triticum aestivum.

Troy J Stephenson, C Lynne McIntyre, Christopher Collet, Gang-Ping Xue

Abstract read
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In one paragraph

Article in Functional & integrative genomics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
5.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 92 citations in OpenAlex.

  1. Plant signaling & behavior · 2026
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  2. Article
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  6. Overexpression of anFrontiers in plant science · 2022
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  7. NF-YB family transcription factors inFrontiers in microbiology · 2022
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  8. Article
  9. Article
  10. Frontiers in plant science · 2020
    Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Introgression of UfCyt cMolecular biology reports · 2018
    Article
  16. Article
  17. Article
  18. Major genes determining yield-related traits in wheat and barley.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Review
  19. Fine Mapping ofFrontiers in plant science · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Troy J StephensonCSIRO Plant Industry, 306 Carmody Road, St Lucia, Brisbane, QLD 4067, Australia. troy.stephenson@csiro.au
C Lynne McIntyre
Christopher Collet
Gang-Ping Xue
Commonwealth Scientific and Industrial Research Organisation · AUQueensland University of Technology · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nuclear factor Y (NF-Y) transcription factor is a heterotrimer comprised of three subunits: NF-YA, NF-YB and NF-YC. Each of the three subunits in plants is encoded by multiple genes with differential expression profiles, implying the functional specialisation of NF-Y subunit members in plants. In this study, we investigated the roles of NF-YB members in the light-mediated regulation of photosynthesis genes. We identified two NF-YB members from Triticum aestivum (TaNF-YB3 & 7) which were markedly upregulated by light in the leaves and seedling shoots using quantitative RT-PCR. A genome-wide coexpression analysis of multiple Affymetrix Wheat Genome Array datasets revealed that TaNF-YB3-coexpressed transcripts were highly enriched with the Gene Ontology term photosynthesis. Transgenic wheat lines constitutively overexpressing TaNF-YB3 had a significant increase in the leaf chlorophyll content, photosynthesis rate and early growth rate. Quantitative RT-PCR analysis showed that the expression levels of a number of TaNF-YB3-coexpressed transcripts were elevated in the transgenic wheat lines. The mRNA level of TaGluTR encoding glutamyl-tRNA reductase, which catalyses the rate-limiting step of the chlorophyll biosynthesis pathway, was significantly increased in the leaves of the transgenic wheat. Significant increases in the expression level in the transgenic plant leaves were also observed for four photosynthetic apparatus genes encoding chlorophyll a/b-binding proteins (Lhca4 and Lhcb4) and photosystem I reaction centre subunits (subunit K and subunit N), as well as for a gene coding for chloroplast ATP synthase γ subunit. These results indicate that TaNF-YB3 is involved in the positive regulation of a number of photosynthesis genes in wheat.

Indexed as

Gene Expression Regulation, PlantCCAAT-Binding FactorChlorophyllGene Expression ProfilingPhotosynthesisPhotosystem I Protein ComplexPlant LeavesPlants, Genetically ModifiedRNA, Transfer, Amino AcylTriticumCCAAT-Binding FactorChlorophyllnuclear factor YPhotosystem I Protein ComplexRNA, Transfer, Amino Acyl

Identifiers

PMID21327447
OpenAlexW2026660172

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.