Evidence map›Paper›PMID 21326898›Full record

ArticleTranscription

Modulation of RNA polymerase activity through the trigger loop folding.

Nataliya Miropolskaya, Vadim Nikiforov, Saulius Klimasauskas, Irina Artsimovitch, Andrey Kulbachinskiy

Abstract read
In one paragraph

Article in Transcription. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. CBR antimicrobials inhibit RNA polymerase via at least two bridge-helix cap-mediated effects on nucleotide addition.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nataliya MiropolskayaInstitute of Molecular Genetics, Russian Academy of Sciences, Moscow, Russia.
Vadim Nikiforov
Saulius Klimasauskas
Irina Artsimovitch
Andrey Kulbachinskiy

Funding

Mechnanism of transcript elongation control by RfaHR01GM067153 · NIGMS · OHIO STATE UNIVERSITY · PI IRINA ARTSIMOVITCH · 2003 to 2026
$8.0M
NIGMS NIH HHS GM67153NIGMS NIH HHS R01 GM067153
6 · The paper itself

Abstract

Folding of the trigger loop of RNA polymerase promotes nucleotide addition through creating a closed, catalytically competent conformation of the active center. Here, we discuss the impact of adjacent RNA polymerase elements, including the F loop and the jaw domain, as well as external regulatory factors on the trigger loop folding and catalysis.

Indexed as

Protein FoldingTranscription, GeneticAmino Acid SequenceBiocatalysisDNA-Directed RNA PolymerasesModels, MolecularMolecular Sequence DataMutationProtein ConformationProtein Structure, SecondaryProtein Structure, TertiarySequence Homology, Amino AcidTemperatureDNA-Directed RNA Polymerasesnucleotide discriminationRNA polymerasetemperature adaptationtranscription elongation complextrigger loop

Identifiers

PMID21326898
PMCPMC3023635

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.